KRISHI
ICAR RESEARCH DATA REPOSITORY FOR KNOWLEDGE MANAGEMENT
(An Institutional Publication and Data Inventory Repository)
"Not Available": Please do not remove the default option "Not Available" for the fields where metadata information is not available
"1001-01-01": Date not available or not applicable for filling metadata infromation
"1001-01-01": Date not available or not applicable for filling metadata infromation
Please use this identifier to cite or link to this item:
http://krishi.icar.gov.in/jspui/handle/123456789/13718
Title: | An Exploratory Statistical Analysis of Phytoplasma Protein Sequence Associated with Coconut ( Cocos nucifera ) Root Disease Isolated from Malabar Coastal Region of India |
Other Titles: | Not Available |
Authors: | Sandip Shil and Kishore K. Das |
ICAR Data Use Licennce: | http://krishi.icar.gov.in/PDF/ICAR_Data_Use_Licence.pdf |
Author's Affiliated institute: | ICAR::Central Plantation Crops Research Institute |
Published/ Complete Date: | 2015-04-01 |
Project Code: | Not Available |
Keywords: | Coconut root disease, Protein sequence analysis, Chou-Fasman algorithm, Secondary structure |
Publisher: | Journal of the Indian Society of Coastal Agricultural Research |
Citation: | Not Available |
Series/Report no.: | Not Available; |
Abstract/Description: | Phytoplasma, the causal agent of coconut root disease (CRD), has been considered as a serious threat to coconut production in the Malabar coastal region of India. The disease is non lethal, but causes a considerable economic loss in India, every year. It has already been reported that species of the phytoplasma, belonging to ribosomal group 16SrXI, are primarily associated this disease. In present study, our objective is to explore more information that is already hidden within this phytoplasma protein sequence, using important statistical techniques. Therefore, we explored all important statistics with regard to the CRD phytoplasma protein sequence and further, predicted its secondary structure using Chou-Fasman algorithm. We obtained the value 8.3 of iso-electronic point of this protein, and also found that its predicted secondary structure consists of 5 helical regions, 6 beta sheet regions and 2 beta turn regions. A comparative analysis of the sequence with the sequences of phytoplasma related to other economically important crops revealed that there was no evidence of significant difference within the secondary structures of the selected sequences at 5% level of significance. |
Description: | Not Available |
ISSN: | 0972-1584 |
Type(s) of content: | Journal |
Sponsors: | Not Available |
Language: | English |
Name of Journal: | Journal of the Indian Society of Coastal Agricultural Research |
NAAS Rating: | 5.17 |
Volume No.: | 33(2) |
Page Number: | 69-72 |
Name of the Division/Regional Station: | Not Available |
Source, DOI or any other URL: | http://www.iscar.org.in/urls/publication.html |
URI: | http://krishi.icar.gov.in/jspui/handle/123456789/13718 |
Appears in Collections: | HS-CPCRI-Publication |
Files in This Item:
There are no files associated with this item.
Items in KRISHI are protected by copyright, with all rights reserved, unless otherwise indicated.