KRISHI
ICAR RESEARCH DATA REPOSITORY FOR KNOWLEDGE MANAGEMENT
(An Institutional Publication and Data Inventory Repository)
"Not Available": Please do not remove the default option "Not Available" for the fields where metadata information is not available
"1001-01-01": Date not available or not applicable for filling metadata infromation
"1001-01-01": Date not available or not applicable for filling metadata infromation
Please use this identifier to cite or link to this item:
http://krishi.icar.gov.in/jspui/handle/123456789/64538
Title: | Role of miRNAs in the host–pathogen interaction between sugarcane and Colletotrichum falcatum, the red rot pathogen |
Other Titles: | Not Available |
Authors: | Nandakumar M., P. Malathi, A.R. Sundar, C.P.Rajadurai, M. Philip, R. Viswanathan |
ICAR Data Use Licennce: | http://krishi.icar.gov.in/PDF/ICAR_Data_Use_Licence.pdf |
Author's Affiliated institute: | ICAR::Sugarcane Breeding Institute |
Published/ Complete Date: | 2021-05-01 |
Project Code: | Not Available |
Keywords: | Sugarcane miRNAs, Host–pathogen interaction, Resistance mechanism |
Publisher: | Springer Berlin Heidelberg |
Citation: | 1 |
Series/Report no.: | Not Available; |
Abstract/Description: | Resistance against the fungal pathogen Colletotrichum falcatum causing red rot is one of the most desirable traits for sustainable crop cultivation in sugarcane. To gain new insight into the host defense mechanism against C. falcatum, we studied the role of sugarcane microRNAs during compatible and incompatible interactions by adopting the NGS platform. We have sequenced a total of 80 miRNA families that comprised 980 miRNAs, and the putative targets of the miRNAs include transcription factors, membrane-bound proteins, glutamate receptor proteins, lignin biosynthesis proteins, signaling cascade proteins, transporter proteins, mitochondrial proteins, ER proteins, defense-related, stress response proteins, translational regulation proteins, cell proliferation, and ubiquitination proteins. Further, qRT-PCR analyses of 8 differentially regulated miRNAs and 26 gene transcript targets expression indicated that these miRNAs have a regulatory effect on the expression of respective target genes in most of the cases. Also, the results suggest that certain miRNA regulates many target genes that are involved in inciting early responses to the pathogen infection, signaling pathways, endoplasmic reticulum stress, and resistance gene activation through feedback response from various cellular processes during the compatible and incompatible interaction with the red rot pathogen C. falcatum. The present study revealed the role of sugarcane miRNAs and their target genes during sugarcane - C. falcatum interaction and provided new insight into the miRNA mediated defense mechanism in sugarcane for the first time |
Description: | Not Available |
ISSN: | 0721-7714 |
Type(s) of content: | Research Paper |
Sponsors: | Not Available |
Language: | English |
Name of Journal: | Plant Cell Reports |
Impact Factor: | 4.488 |
Volume No.: | 40(5) |
Page Number: | 851-870 |
Name of the Division/Regional Station: | Division of crop protection |
Source, DOI or any other URL: | https://doi.org/10.1007/s00299-021-02682-9 |
URI: | http://krishi.icar.gov.in/jspui/handle/123456789/64538 |
Appears in Collections: | CS-SBI-Publication |
Files in This Item:
There are no files associated with this item.
Items in KRISHI are protected by copyright, with all rights reserved, unless otherwise indicated.