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Please use this identifier to cite or link to this item:
http://krishi.icar.gov.in/jspui/handle/123456789/13490
Title: | Draft genome sequence of Cercospora canescens: a leaf spot causing pathogen |
Other Titles: | Not Available |
Authors: | Ramesh Chand Chhattar Pal Vineeta Singh Manoj Kumar Vinay Kumar Singh Chowdappa, P |
ICAR Data Use Licennce: | http://krishi.icar.gov.in/PDF/ICAR_Data_Use_Licence.pdf |
Author's Affiliated institute: | ICAR::Central Plantation Crops Research Institute |
Published/ Complete Date: | 2015-01-01 |
Project Code: | Not Available |
Keywords: | Cercospora canescens functional annotation gene prediction sequencing assembly Vignaradiata |
Publisher: | Not Available |
Citation: | CURRENT SCIENCE, VOL. 109, NO. 11, 10 DECEMBER 2015 |
Series/Report no.: | Not Available; |
Abstract/Description: | Cercospora canescens (Ellis and Martin) is a hemibiotrophic pathogen causing leaf spot disease on mungbean (Vigna radiata L). Genome sequence (~33.97 Mb) assembled in 8239 contigs with 10627 protein coding genes. A total of 2842 proteins were identified as homologous of 223 predicted and 7562 putative uncharacterized involved in biological processes, molecular functions. The identified proteins are mainly involved in infection process used to compromise nutrients or destroy host tissues gycosidases, transposases, cytochrome P450s, genes codes to signal transduction, cell wall breakdown, transporters, host stomata perception, adhesion, polyketide synthase and cercosporin. A total of 528 simple sequence repeats were also identified from the genome sequence assembly of C. canescens. This study provides insights into pathogenic mechanism and a better understanding of virulence differentiation of C. canescens. It will also help in identification of similarity and differences in regions among the genomes of different species of Cercospora. |
Description: | Not Available |
ISSN: | Not Available |
Type(s) of content: | Article |
Sponsors: | Not Available |
Language: | English |
Name of Journal: | Current Science |
NAAS Rating: | 6.73 |
Volume No.: | VOL. 109, NO. 11 |
Page Number: | 1-10 |
Name of the Division/Regional Station: | Not Available |
Source, DOI or any other URL: | Not Available |
URI: | http://krishi.icar.gov.in/jspui/handle/123456789/13490 |
Appears in Collections: | HS-CPCRI-Publication |
Files in This Item:
File | Description | Size | Format | |
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Draft genome sequence.pdf | 440.93 kB | Adobe PDF | View/Open |
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