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http://krishi.icar.gov.in/jspui/handle/123456789/28688Full metadata record
| DC Field | Value | Language |
|---|---|---|
| dc.contributor.author | Nitin Virmani | en_US |
| dc.date.accessioned | 2019-12-07T09:28:11Z | - |
| dc.date.available | 2019-12-07T09:28:11Z | - |
| dc.date.issued | 2011-04-14 | - |
| dc.identifier.citation | Not Available | en_US |
| dc.identifier.issn | Not Available | - |
| dc.identifier.uri | http://krishi.icar.gov.in/jspui/handle/123456789/28688 | - |
| dc.description | Not Available | en_US |
| dc.description.abstract | India faced an epizootic of equine influenza in 2008–2009. The isolated viruses were typed as H3N8 and grouped with the clade 2 viruses of Florida sublineage on the basis of haemagglutinin (HA) gene sequence analysis. This report describes the genetic analysis and selection pressure of matrix (M) and non-structural 1 (NS1) genes of the Indian isolates. All isolates shared 98.41% and 99.54% homology with other clade 2 viruses of Asian origin for M1 and M2 amino acid (aa) sequences, respectively. There were 3 and 4 unique aa residue changes respectively in M1 and M2 proteins in all Asian isolates. Phylogenetic analysis revealed clustering of Indian and Chinese isolates in a separate group designated here as Asian clade for M gene. Indian and Chinese isolates shared homology ranging from 98.17% to 99.08% at aa level. The M and NS1 genes were under negative selection pressure with estimated magnitude of pressure (v) 0.054, 0.581 and 0.30 for M1, M2 and NS1, respectively. | en_US |
| dc.description.sponsorship | Not Available | en_US |
| dc.language.iso | English | en_US |
| dc.publisher | Not Available | en_US |
| dc.relation.ispartofseries | Not Available; | - |
| dc.subject | equine influenza | en_US |
| dc.title | Genetic analysis of the matrix and non-structural genes of equine influenza virus (H3N8) from epizootic of 2008–2009 in India | en_US |
| dc.title.alternative | Not Available | en_US |
| dc.type | Article | en_US |
| dc.publication.projectcode | Not Available | en_US |
| dc.publication.journalname | Veterinary Microbiology | en_US |
| dc.publication.volumeno | Not Available | en_US |
| dc.publication.pagenumber | Not Available | en_US |
| dc.publication.divisionUnit | Not Available | en_US |
| dc.publication.sourceUrl | doi:10.1016/j.vetmic.2011.04.011 | en_US |
| dc.publication.authorAffiliation | ICAR::National Research Centre on Equines | en_US |
| dc.ICARdataUseLicence | http://krishi.icar.gov.in/PDF/ICAR_Data_Use_Licence.pdf | en_US |
| dc.publication.naasrating | 9.03 | en_US |
| Appears in Collections: | AS-NRCE-Publication | |
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