KRISHI
ICAR RESEARCH DATA REPOSITORY FOR KNOWLEDGE MANAGEMENT
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Please use this identifier to cite or link to this item:
http://krishi.icar.gov.in/jspui/handle/123456789/49460
Full metadata record
DC Field | Value | Language |
---|---|---|
dc.contributor.author | Iliyas, R. | en_US |
dc.contributor.author | N.S. Nagpure | en_US |
dc.contributor.author | P. Srivastava | en_US |
dc.contributor.author | A.K. Pathak | en_US |
dc.contributor.author | R. Kumar | en_US |
dc.contributor.author | V. S. Baisvar | en_US |
dc.contributor.author | M. Singh | en_US |
dc.contributor.author | B. Kushwaha | en_US |
dc.date.accessioned | 2021-07-23T06:14:46Z | - |
dc.date.available | 2021-07-23T06:14:46Z | - |
dc.date.issued | 2017-07-10 | - |
dc.identifier.citation | Iliyas Rashid, Naresh Sahebrao Nagpure, Prachi Srivastava, Ajey Kumar Pathak, Ravindra Kumar, Vishwamitra Singh Baisvar, Mahender Singh and Basdeo Kushwaha. 2017. HRE Finder: A Tool for Quarrying Hypoxia-Response Element in Genomic Sequences.Int.J.Curr.Microbiol.App.Sci. 6(7): 1580-1586. doi: https://doi.org/10.20546/ijcmas.2017.607.190 | en_US |
dc.identifier.issn | 2319-7706 | - |
dc.identifier.uri | http://krishi.icar.gov.in/jspui/handle/123456789/49460 | - |
dc.description | Not Available | en_US |
dc.description.abstract | During hypoxia, the hypoxia inducible factor (HIF) binds to hypoxia-response elements (HRE) and induces the expression of hypoxia-inducible genes (HIG). A functionally active HRE typically contains an adjacent hypoxia ancillary sequence (HAS) in its downstream within the space of 7-15 nt. Here, a computational tool 'HRE Finder' is discussed using an example data set. The tool provides the ability for mining canonical HREs and predicting functional HREs in the upstream region of genes, which can be an indispensable tool for genome-wide analysis and identification of hypoxia inducible genes in vertebrates. | en_US |
dc.description.sponsorship | CABin, ICAR-IASRI, New Delhi. | en_US |
dc.language.iso | English | en_US |
dc.publisher | Excellent Publishers | en_US |
dc.relation.ispartofseries | Not Available; | - |
dc.subject | Database | en_US |
dc.subject | Hypoxia inducible factor | en_US |
dc.subject | Hypoxia response element | en_US |
dc.subject | Hypoxia | en_US |
dc.subject | Transcription | en_US |
dc.subject | Gene | en_US |
dc.subject | Enhancer | en_US |
dc.subject | Search algorithm | en_US |
dc.title | HRE Finder: A Tool for Quarrying Hypoxia-Response Element in Genomic Sequences | en_US |
dc.title.alternative | Not Available | en_US |
dc.type | Research Paper | en_US |
dc.publication.projectcode | Not Available | en_US |
dc.publication.journalname | International Journal of Current Microbiology and Applied Sciences | en_US |
dc.publication.volumeno | 6(7) | en_US |
dc.publication.pagenumber | 1580-1586 | en_US |
dc.publication.divisionUnit | Molecular Biology and Biotechnology Division | en_US |
dc.publication.sourceUrl | 10.20546/ijcmas.2017.607.190 | en_US |
dc.publication.sourceUrl | https://doi.org/10.20546/ijcmas.2017.607.190 | en_US |
dc.publication.authorAffiliation | ICAR- National Bureau of Fish Genetic Resources, Lucknow | en_US |
dc.publication.authorAffiliation | AMITY Institute of Biotechnology, AMITY University Uttar Pradesh, Lucknow | en_US |
dc.publication.authorAffiliation | ICAR- Central Institute of Fisheries Education, Mumbai | en_US |
dc.ICARdataUseLicence | http://krishi.icar.gov.in/PDF/ICAR_Data_Use_Licence.pdf | en_US |
dc.publication.journaltype | A multidisciplinary peer-reviewed journal aims to publish all the latest and outstanding research articles. Review and letters in all areas of major importance to techniques of microbiology and applied research with publishes high quality of review and research articles on novel aspects of Microbiology including Environmental, Food, Agricultural, Medical, Pharmaceutical, Veterinary, Soil, Water and Biodeterioration | en_US |
Appears in Collections: | FS-NBFGR-Publication |
Files in This Item:
File | Description | Size | Format | |
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HREFinder-1.pdf | 496.32 kB | Adobe PDF | View/Open |
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