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http://krishi.icar.gov.in/jspui/handle/123456789/52419| Title: | Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments |
| Other Titles: | Not Available |
| Authors: | Rajeev K Varshney Chengcheng Shi Mahendar Thudi Cedric Mariac Jason Wallace Peng Qi He Zhang Yusheng Zhao Xiyin Wang Abhishek Rathore Rakesh K Srivastava Annapurna Chitikineni Guangyi Fan Prasad Bajaj Somashekhar Punnuri S K Gupta Hao Wang Yong Jiang Marie Couderc Mohan A V S K Katta Dev R Paudel K D Mungra Wenbin Chen Karen R Harris-Shultz Vanika Garg Neetin Desai Dadakhalandar Doddamani Ndjido Ardo Kane Joann A Conner Arindam Ghatak Palak Chaturvedi Sabarinath Subramaniam Om Parkash Yadav Cécile Berthouly-Salazar Falalou Hamidou Jianping Wang Xinming Liang Jérémy Clotault Hari D Upadhyaya Philippe Cubry Bénédicte Rhoné Mame Codou Gueye Ramanjulu Sunkar Christian Dupuy Francesca Sparvoli Shifeng Cheng R S Mahala Bharat Singh Rattan S Yadav Eric Lyons Swapan K Datta C Tom Hash Katrien M Devos Edward Buckler Jeffrey L Bennetzen Andrew H Paterson Peggy Ozias-Akins Stefania Grando Jun Wang Trilochan Mohapatra Wolfram Weckwerth Jochen C Reif Xin Liu Yves Vigouroux Xun Xu |
| ICAR Data Use Licennce: | http://krishi.icar.gov.in/PDF/ICAR_Data_Use_Licence.pdf |
| Author's Affiliated institute: | 1International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Hyderabad, Telangana State, India. 2BGI-Shenzhen, Shenzhen, China. 3Institut de recherche pour le développement (IRD), Montpellier, France. 4University of Georgia, Athens, Georgia, USA. 5Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Gatersleben, Germany. 6Fort Valley State University, Fort Valley, Georgia, USA. 7Cornell University, Ithaca, New York, USA. 8University of Florida, Gainesville, Florida, USA. 9Junagadh Agricultural University, Jamnagar, Gujarat, India. 10United States Department of Agriculture—Agricultural Research Service (USDA-ARS), Tifton, Georgia, USA. 11Department of Ecogenomics and Systems Biology, University of Vienna, Vienna, Austria. 12Amity University, Mumbai, Maharashtra, India. 13Institut Sénégalais de Recherches Agricoles (ISRA), Dakar, Senegal. 14University of Georgia, Tifton, Georgia, USA. 15School of Bioinformatics and Biotechnology, D.Y. Patil University, Mumbai, Maharashtra, India. 16University of Arizona, Tucson, Arizona, USA. 17Phoenix Bioinformatics, Redwood City, California, USA. 18Indian Council of Agricultural Research (ICAR)—Central Arid Zone Research Institute (CAZRI), Jodhpur, Rajasthan, India. 19Laboratoire Mixte International Adaptation des Plantes et Microorganismes Associés aux Stress Environnementaux, Centre de Recherche de Bel Air, Dakar, Senegal. 20ICRISAT Sahelian Center, Niamey, Niger. 21Faculty of Sciences and Techniques, University Abdou Moumouni, Niamey, Niger. 22University of Montpellier, Montpellier, France. 23Laboratoire de biométrie et Biologie Evolutive, Université Lyon 1, Villeurbanne, France. 24Oklahoma State University, Stillwater, Oklahoma, USA. 25Institut des Mondes Africains (IMAf), Paris, France. 26CNR-Consiglio Nazionale delle Ricerche, Istituto di Biologia e Biotecnologia Agraria, Milan, Italy. 27Pioneer Hi-Bred Private Limited, Hyderabad, Telangana State, India. 28Institute of Biological, Environmental and Rural Sciences, Aberystwyth University, Ceredigion, UK. 29Visva-Bharati, Santiniketan, West Bengal, India. 30USDA-ARS, Ithaca, New York, USA. 31Indian Council of Agricultural Research (ICAR), New Delhi, India. 32Vienna Metabolomics Center (VIME), University of Vienna, Vienna, Austria. 33BGI-Qingdao, Qingdao, China. 34China National GeneBank (CNGB), Shenzhen, China. |
| Published/ Complete Date: | 2017-09-18 |
| Project Code: | Not Available |
| Keywords: | Pearl millet genome sequencE agronomic trait arid environment |
| Publisher: | NATURE BIOTECHNOLOGY |
| Citation: | Not Available |
| Series/Report no.: | Not Available; |
| Abstract/Description: | Pearl millet [Cenchrus americanus (L.) Morrone] is a staple food for more than 90 million farmers in arid and semi-arid regions of sub-Saharan Africa, India and South Asia. We report the ~1.79 Gb draft whole genome sequence of reference genotype Tift 23D2B1-P1-P5, which contains an estimated 38,579 genes. We highlight the substantial enrichment for wax biosynthesis genes, which may contribute to heat and drought tolerance in this crop. We resequenced and analyzed 994 pearl millet lines, enabling insights into population structure, genetic diversity and domestication. We use these resequencing data to establish marker trait associations for genomic selection, to define heterotic pools, and to predict hybrid performance. We believe that these resources should empower researchers and breeders to improve this important staple crop. |
| Description: | Not Available |
| ISSN: | Not Available |
| Type(s) of content: | Research Paper |
| Sponsors: | Not Available |
| Language: | English |
| Name of Journal: | Nature Biotechnology |
| NAAS Rating: | 20 |
| Volume No.: | 35 |
| Page Number: | 10 |
| Name of the Division/Regional Station: | Not Available |
| Source, DOI or any other URL: | https://www.nature.com/articles/nbt.3943 https://pubmed.ncbi.nlm.nih.gov/28922347/ |
| URI: | http://krishi.icar.gov.in/jspui/handle/123456789/52419 |
| Appears in Collections: | NRM-CAZRI-Publication |
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