KRISHI
ICAR RESEARCH DATA REPOSITORY FOR KNOWLEDGE MANAGEMENT
(An Institutional Publication and Data Inventory Repository)
"Not Available": Please do not remove the default option "Not Available" for the fields where metadata information is not available
"1001-01-01": Date not available or not applicable for filling metadata infromation
"1001-01-01": Date not available or not applicable for filling metadata infromation
Please use this identifier to cite or link to this item:
http://krishi.icar.gov.in/jspui/handle/123456789/80156
Title: | Computational identification of microRNAs and their target genes in sesame (Sesamum indicum L.) |
Authors: | Supriya Purru Sunil Archak |
Published/ Complete Date: | 2022-12-1 |
Keywords: | Gene ontology,MicroRNA,psRNAtarget server,transcripts |
Publisher: | Not Available |
Citation: | Supriya, P., Kumar, A., Archak, S., & Bhat, K. (2022). Computational identification of microRNAs and their target genes in sesame (Sesamum indicum L.). INDIAN JOURNAL OF GENETICS AND PLANT BREEDING, 82(04). |
Series/Report no.: | |
Abstract/Description: | MicroRNAs (miRNAs) are non-coding small RNAs, which play a crucial function in specific biological and metabolic processes of plants and animals. MicroRNAs are very small sequences of 18 to 26 nucleotides length, which regulate gene expression through either inhibition of mRNA translation or mRNA cleavage by binding to target mRNAs. EST-based homology search, a powerful and comparative computational approach, is applied to detect conserved miRNAs in sesame. A homology search of previously identified miRNAs of Viridiplantae was performed against 16548 transcripts of sesame so as to detect novel miRNAs of sesame crop. In the present study, 4 potential miRNAs were detected through various stringent filtering criteria. Using psRNATarget server, 143 potential target genes were predicted which corresponds to the predicted miRNAs in sesame. The target genes tend primarily to encode DNA-binding proteins, transcription factors, stress-responsive genes and genes that regulate signal transduction. Results from the current study will hasten the way for understanding some mechanisms of post-transcriptional gene silencing and other functions of miRNAs in sesame. |
Description: | Not Available |
ISBN: | Not Available |
ISSN: | 0019-5200 |
Type(s) of content: | Research Paper |
Language: | English |
Name of Journal: | Indian Journal of Genetics and Plant Breeding |
NAAS Rating: | 6.51 |
Impact Factor: | 0 |
Page Number: | 469-473 |
Source, DOI or any other URL: | https://www.isgpb.org/journal/index.php/IJGPB/article/view/3801 |
URI: | http://krishi.icar.gov.in/jspui/handle/123456789/80156 |
Appears in Collections: | AEdu-NAARM-Publication |
Files in This Item:
File | Description | Size | Format | |
---|---|---|---|---|
Krishi_Distribution_License.pdf | License | 57.21 kB | Adobe PDF | View/Open |
Items in KRISHI are protected by copyright, with all rights reserved, unless otherwise indicated.