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http://krishi.icar.gov.in/jspui/handle/123456789/80917| Title: | Bacterial diversity in rhizosphere of Paspalum scrobiculatum L. (kodo millet) is revealed with shotgun metagenome sequencing and data analysis |
| Other Titles: | Not Available |
| Authors: | Ratna Prabha Dhananjaya P. Singh Mukesh K. Verma Pramod Sahu Prafull Kumar |
| ICAR Data Use Licennce: | http://krishi.icar.gov.in/PDF/ICAR_Data_Use_Licence.pdf |
| Author's Affiliated institute: | Chhattisgarh Swami Vivekananda Technical University , Bhilai , Chhattisgarh , 491107, India ICAR-National Bureau of Agriculturally Important Microorganisms, Indian Council of Agricultural Research, Kushmaur, Maunath Bhanjan 275101, UP, India S. G. College of Agriculture and Research Station, Indira Gandhi Krishi Vishwavidyalaya, Raipur, Jagdalpur, Chhatisgarh 494001, India |
| Published/ Complete Date: | 2018-01-01 |
| Project Code: | Not Available |
| Keywords: | Not Available |
| Publisher: | Elsevier |
| Citation: | Bacterial diversity in rhizosphere of Paspalum scrobiculatum L. (kodo millet) is revealed with shotgun metagenome sequencing and data analysis,Ratna Prabha,Dhananjaya P. Singh, Mukesh K. Verma,Pramod Sahu,Prafull Kumar |
| Series/Report no.: | Not Available; |
| Abstract/Description: | Rhizosphere bacterial communities of kodo millet plant was analyzed from a large metagenome sequence dataset. Plant rhizosphere samples of kodo millet was collected in replicates and the metagenomic sequence data were obtained through shotgun sequencing. Overall sequences in the dataset were 476,649 comprising total read length of 179,349,372 base pairs. Taxonomic data analysis led to characterize α-diversity of 107 species. Dominance of actinobacteria followed by unclassified sequences (derived from Bacteria) was recorded. Raw data along with the analysis result is publicly available from the MG-RAST server with ID mgm4761530.3. |
| Description: | Not Available |
| ISSN: | Not Available |
| Type(s) of content: | Research Paper |
| Sponsors: | Not Available |
| Language: | English |
| Name of Journal: | Data in Brief |
| Journal Type: | Research |
| Volume No.: | Not Available |
| Page Number: | Not Available |
| Name of the Division/Regional Station: | Not Available |
| Source, DOI or any other URL: | Not Available |
| URI: | http://krishi.icar.gov.in/jspui/handle/123456789/80917 |
| Appears in Collections: | AEdu-IASRI-Publication |
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