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Please use this identifier to cite or link to this item:
http://krishi.icar.gov.in/jspui/handle/123456789/18785
Full metadata record
DC Field | Value | Language |
---|---|---|
dc.contributor.author | Swain P | en_US |
dc.contributor.author | Behera L | en_US |
dc.date.accessioned | 2019-04-24T06:33:30Z | - |
dc.date.available | 2019-04-24T06:33:30Z | - |
dc.date.issued | 2014-12-24 | - |
dc.identifier.citation | Not Available | en_US |
dc.identifier.issn | 2393-8722 | - |
dc.identifier.uri | http://krishi.icar.gov.in/jspui/handle/123456789/18785 | - |
dc.description | Not Available | en_US |
dc.description.abstract | OsCKX2 is an important protein of Oryza sativa which helps in high grain production. The objective is to find out the structure of protein and to represent the best 3D model by using insilico analysis. In Oryza sativa the OsCKX2 is homologous to maize (zea mays) cytokine oxidasedehydrogenase, which is responsible for plant growth and development. The following study was obtained by predicting the 3D structure of OsCKX2 in Oryza sativau using homology modeling concept with the help of bioinformatic tools i.e, 3D-JIGSAW, SWISS-MODEL, MODELLER9.12 and PHYRE2. The 3D structures were further evaluated and steriochemical analysis was done by using RAMPAGE server for Ramachadran plot analysis. The best model was selected on the basis of Z-score and 3D-1D score. | en_US |
dc.description.sponsorship | Not Available | en_US |
dc.language.iso | English | en_US |
dc.publisher | STM Journals | en_US |
dc.relation.ispartofseries | Not Available; | - |
dc.subject | Oryza sativa, OsCKX2 protein, 3D structure, structure prediction, homology | en_US |
dc.title | Comparative structural analysis of Dep1 protein in Oryza sativa. | en_US |
dc.title.alternative | Not Available | en_US |
dc.type | Research Paper | en_US |
dc.publication.projectcode | Not Available | en_US |
dc.publication.journalname | Research & Reviews: A Journal of Bioinformatics | en_US |
dc.publication.volumeno | 1 | en_US |
dc.publication.pagenumber | 43-47 | en_US |
dc.publication.divisionUnit | Crop Improvement Division | en_US |
dc.publication.sourceUrl | www.stmjournals.com | en_US |
dc.publication.authorAffiliation | ICAR::National Rice Research Institute | en_US |
dc.ICARdataUseLicence | http://krishi.icar.gov.in/PDF/ICAR_Data_Use_Licence.pdf | en_US |
Appears in Collections: | CS-NRRI-Publication |
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