KRISHI
ICAR RESEARCH DATA REPOSITORY FOR KNOWLEDGE MANAGEMENT
(An Institutional Publication and Data Inventory Repository)
"Not Available": Please do not remove the default option "Not Available" for the fields where metadata information is not available
"1001-01-01": Date not available or not applicable for filling metadata infromation
"1001-01-01": Date not available or not applicable for filling metadata infromation
Please use this identifier to cite or link to this item:
http://krishi.icar.gov.in/jspui/handle/123456789/29936
Full metadata record
DC Field | Value | Language |
---|---|---|
dc.contributor.author | Rakesh Bhowmick, Soham Choudhudy, ARNS Subbanna, Suman Roy and Laxmi Sharma | en_US |
dc.date.accessioned | 2020-01-14T08:04:27Z | - |
dc.date.available | 2020-01-14T08:04:27Z | - |
dc.date.issued | 2018-12-01 | - |
dc.identifier.citation | Bhowmick, R., Choudhudy, S., Subbanna, A. R. N. S., Roy, S., & Sharma, L. (2019). Genome wide identification of genic and non-genic Microsatellites in Nilaparvata lugens Stål. IJCS, 7(1), 194-196. | en_US |
dc.identifier.issn | Not Available | - |
dc.identifier.uri | http://krishi.icar.gov.in/jspui/handle/123456789/29936 | - |
dc.description | Not Available | en_US |
dc.description.abstract | The brown plant hopper (BPH), Nilaparvata lugens Stål (Homopterous: Delphacidae) is one of the lethal pests in rice. In the present study, genome wide distributed Simple Sequence Repeats (SSR) were identified and analysed. The screening of 1.2 Gb of BPH genome resulted in identification of 271785 SSRs. Out of these, 3231 SSRs were from genic region. Microsatellite distribution in genome was found to be 238.2 SSRs per Mb. Altogether the microsatellite motifs contribute only 7.45Mb of BPH genome. Trinucleotide repeats were most abundant representing 50.8% of total genomic microsatellites. Longer repeat motifs were found to be least abundant in the genome representing 1.1% and 0.5% for pentanucleotide and hexanucleotide, respectively. SSR markers identified from this study can be useful for diversity analysis and genetic map development of BPH. | en_US |
dc.description.sponsorship | Not Available | en_US |
dc.language.iso | English | en_US |
dc.publisher | International Journal of Chemical Studies | en_US |
dc.relation.ispartofseries | Not Available; | - |
dc.subject | brown plant hopper, microsatellite, simple sequence repeats | en_US |
dc.title | Genome wide identification of genic and non-genic Microsatellites in Nilaparvata lugens Stål | en_US |
dc.title.alternative | Not Available | en_US |
dc.type | Research Paper | en_US |
dc.publication.projectcode | Not Available | en_US |
dc.publication.journalname | International Journal of Chemical Studies | en_US |
dc.publication.volumeno | 7(1) | en_US |
dc.publication.pagenumber | 194-196 | en_US |
dc.publication.divisionUnit | Crop Protection Section | en_US |
dc.publication.sourceUrl | Not Available | en_US |
dc.publication.authorAffiliation | ICAR::Vivekananda Parvatiya Krishi Anusandhan Sansthan | en_US |
dc.publication.authorAffiliation | ICAR-IARI | en_US |
dc.ICARdataUseLicence | http://krishi.icar.gov.in/PDF/ICAR_Data_Use_Licence.pdf | en_US |
dc.publication.naasrating | Not Available | en_US |
Appears in Collections: | CS-VPKAS-Publication |
Files in This Item:
File | Description | Size | Format | |
---|---|---|---|---|
2018 international journal of chemical studies 5.13.pdf | 618.82 kB | Adobe PDF | View/Open |
Items in KRISHI are protected by copyright, with all rights reserved, unless otherwise indicated.