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http://krishi.icar.gov.in/jspui/handle/123456789/42354| Title: | Analysis and Functional Annotation of Expressed Sequence Tags of Water Buffalo |
| Other Titles: | Not Available |
| Authors: | Garima Bajetha Jyotika Bhati Sarika M. A. Iquebal Anil Rai Vasu Arora Dinesh Kumar |
| ICAR Data Use Licennce: | http://krishi.icar.gov.in/PDF/ICAR_Data_Use_Licence.pdf |
| Author's Affiliated institute: | ICAR::Indian Agricultural Statistics Research Institute ICAR::National Bureau of Animal Genetic Resources |
| Published/ Complete Date: | 2013-01-01 |
| Project Code: | Not Available |
| Keywords: | Expressed sequence tags Gene ontology Markers Water buffalo |
| Publisher: | Not Available |
| Citation: | Not Available |
| Series/Report no.: | Not Available; |
| Abstract/Description: | An elucidated genome of domestic livestock river buffalo will contribute enormously to economy and better understanding of genome evolution as well. An attempt is made to obtain genomic information on buffalo, based on total Expressed Sequence Tags (ESTs) of Bubalus bubalis available in public domain. These ESTs were annotated and classified into 15 different functional categories based on their homology to the known proteins. Interestingly, 41.79% of the contigs were found to be buffalo specific novel ESTs with respect to other species used in analysis which needs further studies. Also, 224 pSNPs (putative Single Nucleotide Polymorphism) were detected. This study will provide a home base for further genomic studies of buffalo and comparative studies enabling a starting point for the genome annotation of the organism. Supplementary materials are available for this article online. |
| Description: | Not Available |
| ISSN: | Not Available |
| Type(s) of content: | Article |
| Sponsors: | Not Available |
| Language: | English |
| Name of Journal: | Animal Biotechnology |
| NAAS Rating: | 7.49 |
| Volume No.: | 24 |
| Page Number: | 25-30 |
| Name of the Division/Regional Station: | Not Available |
| Source, DOI or any other URL: | DOI: 10.1080/10495398.2012.737884 |
| URI: | http://krishi.icar.gov.in/jspui/handle/123456789/42354 |
| Appears in Collections: | AEdu-IASRI-Publication |
Files in This Item:
| File | Description | Size | Format | |
|---|---|---|---|---|
| Analysis and Functional Annotation of Expressed Sequence Tags of Water Buffalo.pdf | 453.54 kB | Adobe PDF | View/Open |
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