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Title: | Quantitative proteomic analysis reveals novel stress-associated active proteins (SAAPs) and pathways involved in modulating tolerance of wheat under terminal heat |
Other Titles: | Not Available |
Authors: | Ranjeet R. Kumar Khushboo Singh Sumedha Ahuja Mohd. Tasleem Indra Singh Sanjeev Kumar Monendra Grover Dwijesh Mishra Gyanendra K. Rai Suneha Goswami Gyanendra P. Singh Viswanathan Chinnusamy Anil Rai Shelly Praveen |
ICAR Data Use Licennce: | http://krishi.icar.gov.in/PDF/ICAR_Data_Use_Licence.pdf |
Author's Affiliated institute: | ICAR::Indian Agricultural Statistics Research Institute |
Published/ Complete Date: | 2019-03-01 |
Project Code: | Not Available |
Keywords: | iTRAQ SAAPs DEGs Wheat Terminal HS SAGs AGPase Sucrose synthase Soluble starch synthase CDPK Amylases Proteomic 2-DE MALDI qRT-PCR Immunoblotting Thermotolerance Developing grains Endospermic tissue Starch biosynthesis pathway Photosynthesis Source sink ratio RuBisCo HSP17 ITRAQ LEAVES THERMOTOLERANCE EXPRESSION MECHANISM GROWTH PLANT |
Publisher: | FUNCTIONAL & INTEGRATIVE GENOMICS; SPRINGER HEIDELBERG; TIERGARTENSTRASSE 17, D-69121 HEIDELBERG, GERMANY; HEIDELBERG |
Citation: | Not Available |
Series/Report no.: | Not Available |
Abstract/Description: | Terminal heat stress has detrimental effect on the growth and yield of wheat. Very limited information is available on heat stress-associated active proteins (SAAPs) in wheat. Here, we have identified 159 protein groups with 4271 SAAPs in control (22 +/- 3 degrees C) and HS-treated (38 degrees C, 2h) wheat cvs. HD2985 and HD2329 using iTRAQ. We identified 3600 proteins to be upregulated and 5825 proteins to be downregulated in both the wheat cvs. under HS. We observed 60.3% of the common SAAPs showing upregulation in HD2985 (thermotolerant) and downregulation in HD2329 (thermosusceptible) under HS. GO analysis showed proton transport (molecular), photosynthesis (biological), and ATP binding (cellular) to be most altered under HS. Most of the SAAPs identified were observed to be chloroplast localized and involved in photosynthesis. Carboxylase enzyme was observed most abundant active enzymes in wheat under HS. An increase in the degradative isoenzymes (/-amylases) was observed, as compared to biosynthesis enzymes (ADP-glucophosphorylase, soluble starch synthase, etc.) under HS. Transcript profiling showed very high relative fold expression of HSP17, CDPK, Cu/Zn SOD, whereas downregulation of AGPase, SSS under HS. The identified SAAPs can be used for targeted protein-based precision wheat-breeding program for the development of climate-smart' wheat. |
Description: | Not Available |
ISBN: | Not Available |
ISSN: | 1438-793X |
Type(s) of content: | Article |
Sponsors: | Indian Council of Agriculture Research (ICAR) under National Innovation on Climate Resilient Agriculture (NICRA) project [12/115 TG 3079] CABin project [(21-56) TG3064] |
Language: | English |
Name of Journal: | Functional and Integrative Genomics |
NAAS Rating: | 9.06 |
Volume No.: | 19 (2) |
Page Number: | 329-348 |
Name of the Division/Regional Station: | Not Available |
Source, DOI or any other URL: | http://dx.doi.org/10.1007/s10142-018-0648-2 https://pubmed.ncbi.nlm.nih.gov/30465139 Web of Science ID: WOS:000459403100009 |
URI: | http://krishi.icar.gov.in/jspui/handle/123456789/43118 |
Appears in Collections: | AEdu-IASRI-Publication |
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