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http://krishi.icar.gov.in/jspui/handle/123456789/44575| Title: | The Halophile Protein Database |
| Other Titles: | Not Available |
| Authors: | Naveen Sharma Mohammad Samir Farooqi K. K. Chaturvedi Shashi Bhushan Lal Monendra Grover Anil Rai Pankaj Pandey |
| ICAR Data Use Licennce: | http://krishi.icar.gov.in/PDF/ICAR_Data_Use_Licence.pdf |
| Author's Affiliated institute: | ICAR::Indian Agricultural Statistics Research Institute |
| Published/ Complete Date: | 2014-12-01 |
| Project Code: | Not Available |
| Keywords: | Halophile Protein database |
| Publisher: | Oxford University Press |
| Citation: | Sharma N, Farooqi MS, Chaturvedi KK, Lal SB, Grover M, Rai A, Pandey P. The Halophile protein database. Database (Oxford). 2014 Dec 1;2014:bau114. doi: 10.1093/database/bau114. PMID: 25468930; PMCID: PMC4250581. |
| Series/Report no.: | Not Available; |
| Abstract/Description: | Halophilic archaea/bacteria adapt to different salt concentration, namely extreme, moderate and low. These type of adaptations may occur as a result of modification of protein structure and other changes in different cell organelles. Thus proteins may play an important role in the adaptation of halophilic archaea/bacteria to saline conditions. The Halophile protein database (HProtDB) is a systematic attempt to document the biochemical and biophysical properties of proteins from halophilic archaea/bacteria which may be involved in adaptation of these organisms to saline conditions. In this database, various physicochemical properties such as molecular weight, theoretical pI, amino acid composition, atomic composition, estimated half-life, instability index, aliphatic index and grand average of hydropathicity (Gravy) have been listed. These physicochemical properties play an important role in identifying the protein structure, bonding pattern and function of the specific proteins. This database is comprehensive, manually curated, non-redundant catalogue of proteins. The database currently contains 59 897 proteins properties extracted from 21 different strains of halophilic archaea/bacteria. The database can be accessed through link. Database URL: http://webapp.cabgrid.res.in/protein/ |
| Description: | Not Available |
| Type(s) of content: | Research Paper |
| Sponsors: | Not Available |
| Language: | English |
| Name of Journal: | Database (Oxford) |
| NAAS Rating: | Not Available |
| Volume No.: | 2014 |
| Page Number: | Not Available |
| Name of the Division/Regional Station: | Not Available |
| Source, DOI or any other URL: | https:/doi.org/10.1093/database/bau114 |
| URI: | https:/doi.org/10.1093/database/bau114 http://krishi.icar.gov.in/jspui/handle/123456789/44575 |
| Appears in Collections: | AEdu-IASRI-Publication |
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