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Please use this identifier to cite or link to this item:
http://krishi.icar.gov.in/jspui/handle/123456789/61198
Full metadata record
DC Field | Value | Language |
---|---|---|
dc.contributor.author | Rasappa Viswanathan, Chandrasekaran Naveen Prasanth, Palaniyandi Malathi, Amalraj Ramesh Sundar | en_US |
dc.date.accessioned | 2021-09-02T05:34:24Z | - |
dc.date.available | 2021-09-02T05:34:24Z | - |
dc.date.issued | 2016-01-01 | - |
dc.identifier.citation | 17 | en_US |
dc.identifier.issn | 1839-9940 | - |
dc.identifier.uri | http://krishi.icar.gov.in/jspui/handle/123456789/61198 | - |
dc.description | Not Available | en_US |
dc.description.abstract | Colletotrichum falcatum, a concealed fungal ascomycete which causes red rot in sugarcane. It infects economically important stalk tissues, considered as store house of sugar in sugarcane. The study is to find genetic complexities of C. falcatum in establishing this as a stalk infecting pathogen and to decipher the unique lifestyle of this pathogen using NGS technology. Here we report the genome sequence of C. falcatum of ~48.2 Mb with 12270 genes were present which were further compared with other Colletotrichum species publicly available. Phylogenomic analysis indicated that C. falcatum is closely related to C. graminicola (the causal organism of anthracnose in maize). This results brought a new vision to explore the lifestyle of this unique pathogen which infects sugarcane stalk alone as well and helps us to understand the pathogen biology. | en_US |
dc.description.sponsorship | Not Available | en_US |
dc.language.iso | English | en_US |
dc.publisher | Ivyspring International Publisher | en_US |
dc.relation.ispartofseries | Not Available; | - |
dc.subject | Genetic complexities, Phylogenomic analysis, NGS Technology | en_US |
dc.title | Draft genome sequence of Colletotrichum falcatum – a prelude on screening of red rot pathogen in sugarcane | en_US |
dc.title.alternative | Not Available | en_US |
dc.type | Research Paper | en_US |
dc.publication.projectcode | Not Available | en_US |
dc.publication.journalname | Journal of Genomics | en_US |
dc.publication.volumeno | 4 | en_US |
dc.publication.pagenumber | 1-3 | en_US |
dc.publication.divisionUnit | Division of crop protection | en_US |
dc.publication.sourceUrl | doi: 10.7150/jgen.13585 | en_US |
dc.publication.authorAffiliation | ICAR::Sugarcane Breeding Institute | en_US |
dc.ICARdataUseLicence | http://krishi.icar.gov.in/PDF/ICAR_Data_Use_Licence.pdf | en_US |
Appears in Collections: | CS-SBI-Publication |
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