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http://krishi.icar.gov.in/jspui/handle/123456789/72399| Title: | GWAS for main effects and epistatic interactions for grain morphology traits in wheat |
| Other Titles: | Not Available |
| Authors: | Parveen Malik Jitendra Kumar Shiveta Sharma Prabina Kumar Meher Harindra Singh Balyan Pushpendra Kumar Gupta Shailendra Sharma |
| ICAR Data Use Licennce: | http://krishi.icar.gov.in/PDF/ICAR_Data_Use_Licence.pdf |
| Author's Affiliated institute: | Department of Genetics and Plant Breeding, Ch. Charan Singh University, Meerut, U.P, 250 004, India ICAR::Indian Agricultural Statistics Research Institute |
| Published/ Complete Date: | 2022-03-26 |
| Project Code: | Not Available |
| Keywords: | GWAS Morphology traits Phenotyped |
| Publisher: | Springer India |
| Citation: | Malik, P., Kumar, J., Sharma, S., Meher, P.K., Balyan, H.S., Gupta, P.K. and Sharma S. (2022). GWAS for main effects and epistatic interactions for grain morphology traits in wheat. Physiol Mol Biol Plants 28, 651–668. https://doi.org/10.1007/s12298-022-01164-w |
| Series/Report no.: | Not Available; |
| Abstract/Description: | In the present study in wheat, GWAS was conducted for identification of marker trait associations (MTAs) for the following six grain morphology traits: (1) grain cross-sectional area (GCSA), (2) grain perimeter (GP), (3) grain length (GL), (4) grain width (GWid), (5) grain length–width ratio (GLWR) and (6) grain form-density (GFD). The data were recorded on a subset of spring wheat reference set (SWRS) comprising 225 diverse genotypes, which were genotyped using 10,904 SNPs and phenotyped for two consecutive years (2017–2018, 2018–2019). GWAS was conducted using five different models including two single-locus models (CMLM, SUPER), one multi-locus model (FarmCPU), one multi-trait model (mvLMM) and a model for Q x Q epistatic interactions. False discovery rate (FDR) [P value -log10(p) ≥ 5] and Bonferroni correction [P value -log10(p) ≥ 6] (corrected p value < 0.05) were applied to … |
| Description: | Not Available |
| ISSN: | Not Available |
| Type(s) of content: | Research Paper |
| Sponsors: | Not Available |
| Language: | English |
| Name of Journal: | Physiology and Molecular Biology of Plants |
| Volume No.: | 28 |
| Page Number: | 651-668 |
| Name of the Division/Regional Station: | Not Available |
| Source, DOI or any other URL: | https://doi.org/10.1007/s12298-022-01164-w https://link.springer.com/article/10.1007/s12298-022-01164-w |
| URI: | http://krishi.icar.gov.in/jspui/handle/123456789/72399 |
| Appears in Collections: | AEdu-IASRI-Publication |
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