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http://krishi.icar.gov.in/jspui/handle/123456789/9332| Title: | Genetic clustering of recent classical swine fever virus isolates from Karnataka, India revealed the emergence of subtype 2.2 replacing subtype 1.1. |
| Other Titles: | Not Available |
| Authors: | Shivaraj DB Patil SS Rathnamma D Hemadri D Isloor S Geetha S Manjunathareddy GB Gajendragad MR Rahman H |
| ICAR Data Use Licennce: | http://krishi.icar.gov.in/PDF/ICAR_Data_Use_Licence.pdf |
| Author's Affiliated institute: | ICAR::National Institute of Veterinary Epidemiology and Disease Informatics Veterinary College, Bengaluru |
| Published/ Complete Date: | 2015-09-01 |
| Project Code: | Not Available |
| Keywords: | Classical swine fever virus Phylogenetic analysis E2 NS5B 5′UTR |
| Publisher: | Springer |
| Citation: | Not Available |
| Series/Report no.: | Not Available; |
| Abstract/Description: | The phylogenetic analysis of 11 CSFV isolates from Karnataka, India obtained during the year 2012–13 was undertaken to obtain the most reliable genetic typing of the CSFV isolates based on E2, NS5B and 5′UTR genomic regions. The study indicated that all the 11 CSFV isolates belonged to subgroup 2.2. The most reliable classification was obtained with sequence data from the NS5B region which separated all the isolates based on the history of outbreak and geographic origin. Analysis of full length E2 amino acid sequences revealed different genetic makeup of Indian 2.2 isolates compared to 2.2 isolates from different countries. The group 2.2 viruses are gradually spreading as confirmed by frequent detection/ isolation of group 2.2 viruses in the recent years and replacing the subgroup 1.1 viruses, which were hitherto predominantly involved in CSF outbreaks in India |
| Description: | Not Available |
| ISSN: | 2231-0916 |
| Type(s) of content: | Research Paper |
| Sponsors: | Not Available |
| Language: | English |
| Name of Journal: | Virus Disease |
| NAAS Rating: | 5.95 |
| Volume No.: | 26(3) |
| Page Number: | 170-179 |
| Name of the Division/Regional Station: | Not Available |
| Source, DOI or any other URL: | 10.1007/s13337-015-0273-9 |
| URI: | http://krishi.icar.gov.in/jspui/handle/123456789/9332 |
| Appears in Collections: | AS-NIVEDI-Publication |
Files in This Item:
| File | Description | Size | Format | |
|---|---|---|---|---|
| 13337_2015_Article_273.pdf | 1.03 MB | Adobe PDF | View/Open |
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