Record Details

In silico identification of mi-RNAs from Mango (Mangifera indica L.) fruit transcriptome data

KRISHI: Publication and Data Inventory Repository

View Archive Info
 
 
Field Value
 
Title In silico identification of mi-RNAs from Mango (Mangifera indica L.) fruit transcriptome data
Not Available
 
Creator Ahmad Israr, Muthukumar Manoharan, Hudedamani Umesh and Rajan Shailendra
 
Subject microRNA, Mango, transcriptome
 
Description Not Available
Mango (Mangifera indica L.) occupies vital place
among the fruit crops grown in India and is considered
as the king of fruits, owing to its delicious flavour and
taste. Till date no information regarding small RNA
and that of the genomic regions governing them has
been characterized in mango. It is evident that miRNAs
plays crucial role in gene expression and regulation of
complex biological mechanisms in different plant
species. In the present study, through in silico analysis
a total of 18 conserved miRNAs belonging to 15
families were identified from the small RNAs
shortlisted from the transcriptome data set available
from NCBI database. Some of the important miRNAs
identified in the study include min-miRNA 159, min-
miRNA 319, min-miRNA 397, min-miRNA160 and min-
miRNA393.The potential targets predicted were related to genes
that are involved in a wide range of metabolic and
regulatory pathways. GO (Gene Ontology) enrichment
analysis revealed that cellular and metabolic pathways
are the most significant pathways with respect to the
rich factor and gene numbers. These miRNAs identified
in this study were found to be either involved in
development, cell wall metabolism, transport and/or
signalling pathways.
Not Available
 
Date 2021-09-08T10:01:28Z
2021-09-08T10:01:28Z
2018-10-01
 
Type Research Paper
 
Identifier Not Available
Not Available
http://krishi.icar.gov.in/jspui/handle/123456789/61880
 
Language English
 
Relation Not Available;
 
Publisher Not Available