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http://krishi.icar.gov.in/jspui/handle/123456789/12758| Title: | Global analysis of population structure, spatial and temporal dynamics of genetic diversity, and evolutionary lineages of Iris yellow spot virus (Tospovirus: Bunyaviridae) |
| Other Titles: | Not Available |
| Authors: | Romana Iftikhar, Shunmugiah V Ramesh, Sudeep Bag, Muhammad Ashfaq, Hanu R Pappu |
| ICAR Data Use Licennce: | http://krishi.icar.gov.in/PDF/ICAR_Data_Use_Licence.pdf |
| Author's Affiliated institute: | ICAR::Directorate of Soybean Research Washington State University, Pullman, WA USA |
| Published/ Complete Date: | 2014-08-15 |
| Project Code: | DBT CREST Award |
| Keywords: | Gene flow, IYSV, Ngene, RFLP, population genetics |
| Publisher: | Not Available |
| Citation: | Not Available |
| Series/Report no.: | Not Available; |
| Abstract/Description: | hrips-transmitted Iris yellow spot virus is an economically important viral pathogen of Allium crops worldwide. A global analysis of known IYSV nucleocapsid gene (N gene) sequences was carried out to determine the comparative population structure, spatial and temporal dynamics with reference to its genetic diversity and evolution. A total of 98 complete N gene sequences (including 8 sequences reported in this study) available in GenBank and reported from 23 countries were characterized by in-silico RFLP analysis. Based on RFLP, 94% of the isolates could be grouped into NL or BR types while the rest belonged to neither group. The relative proportion of NL and BR types was 46% and 48%, respectively. A temporal shift in the IYSV genotypes with a greater incremental incidence of IYSV BR was found over IYSV NL before 2005 compared to after 2005. |
| Description: | Not Available |
| ISSN: | Not Available |
| Type(s) of content: | Research Paper |
| Sponsors: | Not Available |
| Language: | English |
| Name of Journal: | Gene |
| NAAS Rating: | 8.98 |
| Volume No.: | 547(1) |
| Page Number: | 111-118 |
| Name of the Division/Regional Station: | Not Available |
| Source, DOI or any other URL: | https://www.sciencedirect.com/science/article/pii/S0378111914007008 |
| URI: | http://krishi.icar.gov.in/jspui/handle/123456789/12758 |
| Appears in Collections: | CS-DSBR-Publication |
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