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http://krishi.icar.gov.in/jspui/handle/123456789/15805
Title: | Draft Genome Sequence of Bacillus sp. Strain NSP2.1, a Nonhalophilic Bacterium Isolated from the Salt Marsh of the Great Rann of Kutch, India |
Other Titles: | Not Available |
Authors: | Rinku Dey, Kamal Krishna Pal, Dharmesh Sherathia, Trupti Dalsania, Kinjal Savsani, Ilaxi Patel,Bhoomika Sukhadiya, Mona Mandaliya, Manesh Thomas, Sucheta Ghorai, Sejal Vanpariya, Rupal Rupapara, Priya Rawal, Anil Kumar Saxena |
ICAR Data Use Licennce: | http://krishi.icar.gov.in/PDF/ICAR_Data_Use_Licence.pdf |
Author's Affiliated institute: | ICAR-Directorate of Groundnut Research |
Published/ Complete Date: | 2013-10-24 |
Project Code: | Not Available |
Keywords: | Glimmer,KEGG,tRNAScan-SE,genome |
Publisher: | Genome |
Citation: | Not Available |
Series/Report no.: | Not Available; |
Abstract/Description: | The genomes of a number of species of Bacillus inhabiting the Little Rann and Great Rann of Kutch, India, have been sequenced recently with the aim of understanding their mechanism(s) of osmotolerance (1–3). Bacillus sp. strain NSP2.1 (16SrRNA GenBank accession no. JF802192), a nonhalophilic and endospore-forming bacterium isolated from the salt marsh of the Great Rann of Kutch, India, grows optimally without NaCl in the growth medium (NaCl range, 0 to 4.5%), at 37°C, and a pH 7.5. The genome of Bacillus sp. NSP2.1 was sequenced with the aim of understanding its survival mechanism(s) in the salt marsh. The whole genome of NSP2.1 was sequenced by both shotgun and mate-paired library sequencing using the Roche 454 genome sequencer (GS FLX) at Macrogen Inc., South Korea, through Sequencher Tech Pvt. Ltd., Ahmedabad, India. In shotgun sequencing, 769,707 reads of 347,675,293 bases were obtained (average read length, 451 bp). The sequencing of mate-paired libraries generated 140,804 reads of 63,691,257 bp (average read length, 452 bp) and 140,783 reads of 64,402,285 bp (average read length, 457 bp). |
Description: | Not Available |
Type(s) of content: | Research Paper |
Sponsors: | Not Available |
Language: | English |
Name of Journal: | Genome Announcements |
Volume No.: | 1(5) |
Page Number: | 1-2 |
Name of the Division/Regional Station: | Microbiology |
Source, DOI or any other URL: | Not Available |
URI: | http://krishi.icar.gov.in/jspui/handle/123456789/15805 |
Appears in Collections: | CS-DGR-Publication |
Files in This Item:
File | Description | Size | Format | |
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e00909-13.full Genome A NSP2.1.pdf | 131.75 kB | Adobe PDF | View/Open |
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