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Please use this identifier to cite or link to this item:
http://krishi.icar.gov.in/jspui/handle/123456789/15808
Title: | Draft Genome Sequence of a Moderately Halophilic Bacillus megaterium Strain, MSP20.1, Isolated from a Saltern of the Little Rann of Kutch, India |
Other Titles: | Not Available |
Authors: | Kamal Krishna Pal, Rinku Dey, Dharmesh Sherathia, Sejal Vanpariya, Ilaxi Patel, Trupti Dalsania, Kinjal Savsani, Bhoomika Sukhadiya, Mona Mandaliya, Manesh Thomas, Sucheta Ghorai, Rupal Rupapara, Priya Rawal, Abhi Shah, Sharmila Bhayani |
ICAR Data Use Licennce: | http://krishi.icar.gov.in/PDF/ICAR_Data_Use_Licence.pdf |
Author's Affiliated institute: | ICAR-Directorate of Groundnut Research |
Published/ Complete Date: | 2014-01-09 |
Project Code: | Not Available |
Keywords: | Illumina HiSeq,Glimmer 3,tRNAScan-SE |
Publisher: | Genome |
Citation: | Not Available |
Series/Report no.: | Not Available; |
Abstract/Description: | The genomes of a number of species of Bacillus which can thrive in the salinity gradients (0 to 35% NaCl) of the hypersaline habitats of the Great and Little Rann of Kutch, India, were sequenced recently with a view to understanding the mechanism(s) of osmotolerance (1–5). Bacillus megaterium strain MSP20.1 (16SrRNA GenBank accession number JF802191), isolated from a saltern of the Little Rann of Kutch, India, grows optimally at a concentration of 7.5% NaCl (range, 0 to 20%) in the growth medium, at pH 7.0 and 37°C. The genome of MSP20.1 was sequenced to gain understanding of its moderate halophilism. The genome of MSP20.1 was sequenced using the Illumina HiSeq 2000 platform at Macrogen, Inc., South Korea, through Sequencher Tech Pvt., Ltd., Ahmedabad, India. Originally, a total of 69,373,018 paired-end reads with lengths of 72 nucleotides of 7,006,674,818 bases were generated, which, after filtering and removal of PCR duplicates, resulted in 61,462,320 reads of 6,207,694,320 bases. |
Description: | Not Available |
Type(s) of content: | Research Paper |
Sponsors: | Not Available |
Language: | English |
Name of Journal: | Genome Announcements |
Volume No.: | 2(1) |
Page Number: | 1-2 |
Name of the Division/Regional Station: | Microbiology |
Source, DOI or any other URL: | Not Available |
URI: | http://krishi.icar.gov.in/jspui/handle/123456789/15808 |
Appears in Collections: | CS-DGR-Publication |
Files in This Item:
File | Description | Size | Format | |
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e01134-13.full Genome A MSP20.1 B megaterium.pdf | 134.55 kB | Adobe PDF | View/Open |
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