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http://krishi.icar.gov.in/jspui/handle/123456789/15810
Title: | Draft Genome Sequence of Salinibacillus aidingensis Strain MSP4, an Obligate Halophilic Bacterium Isolated from a Salt Crystallizer of the Rann of Kutch, India |
Other Titles: | Not Available |
Authors: | Kamal Krishna Pal, Rinku Dey, Dharmesh Sherathia, Trupti Dalsania, Kinjal Savsani, Ilaxi Patel, Manesh Thomas, Sucheta Ghorai, Sejal Vanpariya, Rupal Rupapara, Namrata Acharya, Priya Rawal, Pragnesh Joshi, Bhoomika Sukhadiya, Mona Mandaliya, Anil Kumar Saxena |
ICAR Data Use Licennce: | http://krishi.icar.gov.in/PDF/ICAR_Data_Use_Licence.pdf |
Author's Affiliated institute: | ICAR-Directorate of Groundnut Research |
Published/ Complete Date: | 2013-07-05 |
Project Code: | Not Available |
Keywords: | RAST,genome,hypothetical,MSP20.1 |
Publisher: | Not Available |
Citation: | Not Available |
Series/Report no.: | Not Available; |
Abstract/Description: | Salinibacillus aidingensis strain MSP4 (16S rRNA GenBank accession number JX518262), an obligate halophilic and endospore-forming bacterium, was isolated from a salt crystallizer of the Rann of Kutch, India. It grows optimally at a 10% (range, 8 to 23%) NaCl concentration in medium at a 37°C temperature and 7.0 pH. The genome of Salinibacillus aidingensis MSP4 was sequenced with a view to understanding the echanism(s) of osmotolerance and to mine relevant gene(s). The whole genome of MSP4 was sequenced using the Roche 454 Genome Sequencer (GS FLX). Both shotgun and mate-paired library sequencing were performed at Macrogen Inc., South Korea, through Sequencher Tech Pvt. Ltd., Ahmedabad, India. In shotgun sequencing, 761,949 reads of 343,334,611 bases, with an average read length of 450 bp, were generated. In mate-pair libraries, however, 137,026 and 128,147 reads were produced, respectively, with average read lengths of 443 bp and 452 bp, respectively. |
Description: | Not Available |
Type(s) of content: | Research Paper |
Sponsors: | Not Available |
Language: | English |
Name of Journal: | Genome Announcements |
Volume No.: | 1(4) |
Page Number: | 1-2 |
Name of the Division/Regional Station: | Microbiology |
Source, DOI or any other URL: | Not Available |
URI: | http://krishi.icar.gov.in/jspui/handle/123456789/15810 |
Appears in Collections: | CS-DGR-Publication |
Files in This Item:
File | Description | Size | Format | |
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Genome Announcement-2013-KKPal-DGR-Junagadh.pdf | 130.8 kB | Adobe PDF | View/Open |
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