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http://krishi.icar.gov.in/jspui/handle/123456789/15815
Title: | Draft Genome Sequence of the Obligate Halophilic Bacillus sp. Strain NSP22.2, Isolated from a Seasonal Salt Marsh of the Great Rann of Kutch, India |
Other Titles: | Not Available |
Authors: | Rinku Dey, Kamal Krishna Pal, Dharmesh Sherathia, Sejal Vanpariya, Ilaxi Patel, Trupti Dalsania, Kinjal Savsani, Bhoomika Sukhadiya, Mona Mandaliya, Manesh Thomas, Sucheta Ghorai, Rupal Rupapara, Priya Rawal |
ICAR Data Use Licennce: | http://krishi.icar.gov.in/PDF/ICAR_Data_Use_Licence.pdf |
Author's Affiliated institute: | ICAR-Directorate of Groundnut Research |
Published/ Complete Date: | 2013-12-19 |
Project Code: | Not Available |
Keywords: | RNA genes,peunute ,ROS |
Publisher: | Genome |
Citation: | Not Available |
Series/Report no.: | Not Available; |
Abstract/Description: | The genomes of a number of species of Bacillus, isolated from the extremely saline environments of the Rann of Kutch, India, have been sequenced recently to understand the mechanisms of osmotolerance (1–4). Bacillus sp. strain NSP22.2 (16S rRNA GenBank accession no. JF802172), isolated from a seasonal salt marsh of the Great Rann of Kutch, India, grows optimally at a concentration of 7.0% NaCl (range, 5 to 20%) in growth medium, at pH 7.0 and 37°C. The genome of Bacillus sp. strain NSP22.2 was sequenced to understand its obligate and moderate halophilism and to isolate the relevant gene(s). The Illumina HiSeq 2000 platform was used to sequence the genome of NSP22.2 at Macrogen, Inc., South Korea, through Sequencher Tech Pvt. Ltd., Ahmedabad, India. Originally, a total of 66,480,406 paired-end reads of 6,714,521,006 bases were generated, with a length of 72 nucleotides. After filtering (criteria, 90% of bases with a quality value [QV] of 20 for both ends) and the removal of PCR duplicates, 54,215,856 reads of 5,475,801,456 bases were obtained. |
Description: | Not Available |
ISSN: | e01104-13 |
Type(s) of content: | Research Paper |
Sponsors: | Not Available |
Language: | English |
Name of Journal: | Genome Announcements |
Volume No.: | 1(6) |
Page Number: | 1-2 |
Name of the Division/Regional Station: | Microbiology |
Source, DOI or any other URL: | Not Available |
URI: | http://krishi.icar.gov.in/jspui/handle/123456789/15815 |
Appears in Collections: | CS-DGR-Publication |
Files in This Item:
File | Description | Size | Format | |
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KKPal-NSP22.2.pdf | 129.54 kB | Adobe PDF | View/Open |
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