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http://krishi.icar.gov.in/jspui/handle/123456789/22963| Title: | Complete mitochondrial genome sequence of Indian medium carp, Labeo gonius (Hamilton, 1822) and its comparison with other related carp species. |
| Other Titles: | Not Available |
| Authors: | B.K. Behera K. Kumari V.S. Baisvar A.K. Rout S. Pakrashi P. Paria J.K. Jena |
| ICAR Data Use Licennce: | http://krishi.icar.gov.in/PDF/ICAR_Data_Use_Licence.pdf |
| Author's Affiliated institute: | ICAR::Central Inland Fisheries Research Institute ICAR::National Bureau of Fish Genetic Resources |
| Published/ Complete Date: | 2015-01-01 |
| Project Code: | Not Available |
| Keywords: | Cyprinidae; Labeo gonius; mitogenome; next-generation sequencing |
| Publisher: | Not Available |
| Citation: | Behera, B. K., Kumari, K., Baisvar, V. S., Rout, A. K., Pakrashi, S., Paria, P., & Jena, J. K. (2015). Complete mitochondrial genome sequence of Indian medium carp, Labeo gonius (Hamilton, 1822) and its comparison with other related carp species. Mitochondrial DNA, 1-2. |
| Series/Report no.: | Not Available; |
| Abstract/Description: | In the present study, the complete mitochondrial genome sequence of Labeo gonius is reported using PGM sequencer (Ion Torrent). The complete mitogenome of L. gonius is obtained by the de novo sequences assembly of genomic reads using the Torrent Mapping Alignment Program (TMAP) which is 16 614 bp in length. The mitogenome of L. gonius comprised of 13 protein-coding genes, 22 tRNAs, 2 rRNA genes, and D-loop as control region along with gene order and organization, being similar to most of other fish mitogenomes of NCBI databases. The mitogenome in the present study has 99% similarity to the complete mitogenome sequence of Labeo fimbriatus, as reported earlier. The phylogenetic analysis of Cypriniformes depicted that their mitogenomes are closely related to each other. The complete mitogenome sequence of L. gonius would be helpful in understanding the population genetics, phylogenetics, and evolution of Indian Carps. |
| Description: | Not Available |
| ISSN: | Not Available |
| Type(s) of content: | Research Paper |
| Sponsors: | Not Available |
| Language: | English |
| Name of Journal: | Mitochondrial DNA |
| NAAS Rating: | 5 |
| Volume No.: | 1-2. |
| Page Number: | Not Available |
| Name of the Division/Regional Station: | Not Available |
| Source, DOI or any other URL: | https://doi.org/10.3109/19401736.2015.1106517 |
| URI: | http://krishi.icar.gov.in/jspui/handle/123456789/22963 |
| Appears in Collections: | FS-CIFRI-Publication |
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