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http://krishi.icar.gov.in/jspui/handle/123456789/45224| Title: | Novel Isoform Sequencing based full-length transcriptome resource for Indian White Shrimp, Penaeus indicus |
| Other Titles: | Not Available |
| Authors: | K. Vinaya Kumar MS. Shekhar J. Ashok Kumar PK. Sudheesh K. Karthic K. Nimisha CP.Balasubramanian Dushyant Singh Baghel KK.Vijayan Joykrushna Jena T. Mohapatra |
| ICAR Data Use Licennce: | http://krishi.icar.gov.in/PDF/ICAR_Data_Use_Licence.pdf |
| Author's Affiliated institute: | ICAR::Central Institute of Brackishwater Aquaculture |
| Published/ Complete Date: | 2020-12-02 |
| Project Code: | Not Available |
| Keywords: | Isoform Sequencing, PacBio, Iso-Seq, Indian White Shrimp, Penaeus indicus, transcriptome, lncRNA |
| Publisher: | Frontiers |
| Citation: | Katneni VK, Shekhar MS, Jangam AK, Prabhudas SK, Krishnan K, Kaikkolante N, Paran BC, Baghel DS, Koyadan VK, Jena J and Mohapatra T (2020) Novel Isoform Sequencing Based Full-Length Transcriptome Resource for Indian White Shrimp, Penaeus indicus. Front. Mar. Sci. 7:605098. doi: 10.3389/fmars.2020.605098 |
| Series/Report no.: | Not Available; |
| Abstract/Description: | This is the first report of a comprehensive transcriptome generated from different tissues and larval stage of P. indicus with 238.98 Gb of sequence data from gills, hepatopancreas, muscle, and pooled post larvae. The only related complete genome available for shrimp is that of P. vannamei (Zhang et al., 2019b). In the absence of a genome for P. indicus, the full-length trasncriptome generated in this study would be a valuable resource for conducting functional studies involving desired economic traits. |
| Description: | Not Available |
| ISSN: | Not Available |
| Type(s) of content: | Research Paper |
| Sponsors: | Not Available |
| Language: | English |
| Name of Journal: | Frontiers in Marine Science |
| NAAS Rating: | 9.66 |
| Volume No.: | 7 |
| Page Number: | Not Available |
| Name of the Division/Regional Station: | Not Available |
| Source, DOI or any other URL: | doi: 10.3389/fmars.2020.605098 |
| URI: | http://krishi.icar.gov.in/jspui/handle/123456789/45224 |
| Appears in Collections: | FS-CIBA-Publication |
Files in This Item:
| File | Description | Size | Format | |
|---|---|---|---|---|
| 2020 Frontiers in Marine Science 7 605098.pdf | 358.57 kB | Adobe PDF | View/Open |
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