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http://krishi.icar.gov.in/jspui/handle/123456789/70238| Title: | Microbiome of Pukzing Cave in India shows high antimicrobial activity against plant and animal pathogens |
| Other Titles: | Not Available |
| Authors: | M.A. Iquebal Ajit Kumar Passari Jaisri Jagannadham Farzana Ahmad Vincent Vineeth Leo Garima Singh Sarika Jaiswal Anil Rai Dinesh Kumar Bhim Pratap Singh |
| ICAR Data Use Licennce: | http://krishi.icar.gov.in/PDF/ICAR_Data_Use_Licence.pdf |
| Author's Affiliated institute: | ICAR::Indian Agricultural Statistics Research Institute Mizoram University, Aizawl Departamento de Biología Molecular y Biotecnología, Instituto de Investigaciones Biom´edicas, Universidad Nacional Aut´onoma de M´exico (UNAM), Mexico National Institute of Food Technology Entrepreneurship and Management (NIFTEM), Kundli |
| Published/ Complete Date: | 2021-11-01 |
| Project Code: | Not Available |
| Keywords: | Antimicrobial peptides Biosynthetic genes Cave microbial diversity Moderate thermophiles 16s rDNA |
| Publisher: | Elsevier |
| Citation: | M.A. Iquebal, Ajit Kumar Passari, Jaisri Jagannadham, Farzana Ahmad, Vincent Vineeth Leo, Garima Singh, Sarika Jaiswal, Anil Rai, Dinesh Kumar, Bhim Pratap Singh, Microbiome of Pukzing Cave in India shows high antimicrobial activity against plant and animal pathogens, Genomics, Volume 113, Issue 6, 2021, Pages 4098-4108, ISSN 0888-7543, https://doi.org/10.1016/j.ygeno.2021.10.004. |
| Series/Report no.: | Not Available; |
| Abstract/Description: | Pukzing cave, the largest cave of Mizoram, India was explored for bacterial diversity. Culture dependent method revealed 235 bacterial isolates using three different treatments. Identity of the microbial species was confirmed by 16S rDNA sequencing. The highest bacterial population was recovered from heat treatment (n = 97;41.2%) followed by normal (n = 79;33.6%) and cold treatment (n = 59;25.1%) indicating dominance of moderate thermophiles. Antimicrobial potential of isolates showed 20.4% isolates having antimicrobial ability against tested pathogens. Amplicon sequencing of PKSI, PKSII and NRP specific genes revealed presence of AMP genes in the microbial population. Six microbial pathogens were selected for screening as they are well known for different disease cause organism in various fields such as agriculture and human health. Cave environment harbors unique microbial flora and hypervariable region V4 is more informative. Higher activity of AMP assay against these microbes indicates that cave microbial communities could be potential source of future genomic resources. |
| Description: | Not Available |
| ISSN: | Not Available |
| Type(s) of content: | Research Paper |
| Sponsors: | Not Available |
| Language: | English |
| Name of Journal: | Genomics |
| Volume No.: | 113(6) |
| Page Number: | 4098-4108 |
| Name of the Division/Regional Station: | Not Available |
| Source, DOI or any other URL: | https://doi.org/10.1016/j.ygeno.2021.10.004 |
| URI: | http://krishi.icar.gov.in/jspui/handle/123456789/70238 |
| Appears in Collections: | AEdu-IASRI-Publication |
Files in This Item:
| File | Description | Size | Format | |
|---|---|---|---|---|
| Microbiome of Pukzing Cave in India shows high antimicrobial activity against plant and animal pathogens.pdf | 3.65 MB | Adobe PDF | View/Open |
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