KRISHI
ICAR RESEARCH DATA REPOSITORY FOR KNOWLEDGE MANAGEMENT
(An Institutional Publication and Data Inventory Repository)
"Not Available": Please do not remove the default option "Not Available" for the fields where metadata information is not available
"1001-01-01": Date not available or not applicable for filling metadata infromation
"1001-01-01": Date not available or not applicable for filling metadata infromation
Please use this identifier to cite or link to this item:
http://krishi.icar.gov.in/jspui/handle/123456789/49302
Title: | Molecular identification of Bigeyes (Perciformes, Priacanthidae) from Indian waters |
Other Titles: | Not Available |
Authors: | K. K. BINEESH C. MOHITHA N. VINEESH V. S. BASHEER M. JOSELET N. K. G. PILLAI J. K. JENA A. GOPALAKRISHNAN |
ICAR Data Use Licennce: | http://krishi.icar.gov.in/PDF/ICAR_Data_Use_Licence.pdf |
Author's Affiliated institute: | ICAR::National Bureau of Fish Genetic Resources |
Published/ Complete Date: | 2015-12-18 |
Project Code: | Not Available |
Keywords: | Bigeyes COI DNA barcoding Indian waters 16S rRNA |
Publisher: | Taylor & Francis |
Citation: | K. K, B., J. K, J., V. S, B. and Pillai, N.G.K., 2016. Molecular identification of bigeyes (Perciformes, Priacanthidae) from Indian waters. Mitochondrial DNA Part A, 27(6), pp.4638-4642. |
Series/Report no.: | Not Available; |
Abstract/Description: | Thirty-five individuals of six priacanthid fish species were sampled from different localities along the coast of India covering the Arabian Sea and Bay of Bengal. The partial sequence of 16S rRNA and cytochrome oxidase subunit I (COI) genes were analyzed for species identification and phylogenetic relationship among the Indian priacanthids (Priacanthus hamrur, P. prolixus, P. blochii, P. sagittarius, Cookeolus japonicus, and Pristigenys refulgens). The intraspecies genetic distance ranged from 0.000 to 0.002, while distances varied from 0.008 to 0.157 interspecies based on 16S sequences. Using COI data analysis, the intraspecies genetic distance ranged from 0.000 to 0.005, while interspecies distances varied from 0.009 to 0.108. Several sequences labeled Priacanthus hamrur in GenBank are shown to be P. prolixus. We also observed cryptic speciation in Heteropriacanthus cruentatus. Partial sequences of 16S rRNA and COI genes provided phylogenetic information to distinguish thirteen species of priacanthids, indicating the usefulness of molecular markers in species identification. |
Description: | Not Available |
ISSN: | 1940-1736 1940-1744 |
Type(s) of content: | Research Paper |
Sponsors: | Not Available |
Language: | English |
Name of Journal: | Mitochondrial DNA Part A - DNA Mapping, Sequencing & Analysis |
Journal Type: | Research on chemistry and biochemistry and mitochondrial DNA manipulation, proteins in mtDNA metabolism and/or interactions; cytosolic and extracellular mtDNA |
NAAS Rating: | 7.07 |
Impact Factor: | 1.42 |
Volume No.: | 27 |
Page Number: | 4638-4642 |
Name of the Division/Regional Station: | PMFGR, Kochi |
Source, DOI or any other URL: | 10.3109/19401736.2015.1101593 |
URI: | http://krishi.icar.gov.in/jspui/handle/123456789/49302 |
Appears in Collections: | FS-NBFGR-Publication |
Files in This Item:
File | Description | Size | Format | |
---|---|---|---|---|
AGKN_2015_Mitochondrial DNA_Bineesh_Molecular identification of Bigeyes - Priacanthus.pdf | 756.13 kB | Adobe PDF | View/Open |
Items in KRISHI are protected by copyright, with all rights reserved, unless otherwise indicated.