ICAR Research Data Repository for Knowledge Management
Genomic evidence of intraspecific recombination in sugarcane mosaic virus
OAR@ICRISAT
View Archive Info| Field | Value | |
| Relation |
http://oar.icrisat.org/5434/
http://www.springerlink.com/content/0920-8569/ http://dx.doi.org/10.1007/s11262-010-0564-6 |
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| Title |
Genomic evidence of intraspecific recombination in sugarcane mosaic virus
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| Creator |
Padhi, Abinash
Ramu, Karri |
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| Subject |
Genetics and Genomics
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| Description |
The sugarcane mosaic virus (SCMV) of the genus potyvirus, which primarily affects maize, sugarcane, sorghum, abaca, and grasses, occurs worldwide and causes significant economic loss. Using the full genome sequences of SCMV and several recombination detection methods, in this study we report that recombination is the major driving force in the evolution and emergence of several new variants of SCMV. We reported eight highly significant (P < 0.001) recombination break points, majority of which are located within 6K1-VPg-NIaPro-NIb region, thus indicating a region for recombination hotspot. The observation of commonalities of same recombination events among the SCMV isolates between the countries (Spain and Mexico), and within the country (within China, and within Mexico), suggests common origin of the isolates in respective regions.
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| Publisher |
Kluwer
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| Date |
2011
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| Type |
Article
PeerReviewed |
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| Format |
application/pdf
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| Language |
en
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| Rights |
—
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| Identifier |
http://oar.icrisat.org/5434/1/Genomic%20evidence%20of%20intraspecific.pdf
Padhi, Abinash and Ramu, Karri (2011) Genomic evidence of intraspecific recombination in sugarcane mosaic virus. Virus Genes, 42 (2). pp. 282-285. ISSN 1572-994X |
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