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Molecular detection of <i>Candidatus</i> Scalindua flavia, study of anammox bacterial community structure, composition in the sediments of the East China Sea and the Yellow Sea

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Title Molecular detection of Candidatus Scalindua flavia, study of anammox bacterial community structure, composition in the sediments of the East China Sea and the Yellow Sea
 
Creator Shehzad, Ahmed
Qismat, Shakeela
Ibrar, Khan
Faisal, Nouroz
Zeeshan, Niaz
 
Subject Anammox bacterial diversity
Novel Scalindua specie
East China Sea and Yellow Sea
 
Description 33-47
In this study, the diversity, community structure and distribution of anammox bacteria in sediments from five sites of the ECS and YS were explored by using both the 16S rRNA and hzo functional gene biomarkers. A high diversity of anammox bacteria in the studied sites with Candidatus is observed. Scalindua being the dominant group of anammox bacteria. With 16S rRNA gene primers, an inimitable Candidatus. Scalindua phylotype was identified, putatively represented a novel species, and tentatively named “ Candidatus. Scalindua flavia”. In addition, three other distinct clades were also detected with a discrete clustering in the consensus tree. Statistical analysis of environmental variables indicated that NH4+ and PO43- are positively correlated to shape the differential distribution of anammox bacteria in different environments.
 
Date 2017-03-02T08:48:19Z
2017-03-02T08:48:19Z
2017-01
 
Type Article
 
Identifier 0975-1033 (Online); 0379-5136 (Print)
http://nopr.niscair.res.in/handle/123456789/40621
 
Language en_US
 
Rights CC Attribution-Noncommercial-No Derivative Works 2.5 India
 
Publisher NISCAIR-CSIR, India
 
Source IJMS Vol.46(01) [January 2017]