Isolation, Identification and Molecular Characterization of Infectious Laryngotracheitis Virus in Chicken
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Title |
Isolation, Identification and Molecular Characterization of Infectious Laryngotracheitis Virus in Chicken
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Creator |
Puvarajan, B.
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Contributor |
Sukumar, K.
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Description |
A study was undertaken to isolate, identify and characterize the causative agent of Infectious laryngotracheitis (ILT) in layers from field outbreaks in Namakkal area, the leading poultry layer belt and second largest egg bowl of the nation. The prevalence of ILT was observed in the age groups of 7 to 42 weeks in layer chicken. The maximum prevalence was noticed in the age group of 10 to 20 weeks (40.47 %) followed by 20 to 30 weeks (26.19 %). The maximum mortality was observed in 10 to 20 weeks age group (41 %) followed by 20 to 30 weeks (35 %) and the average mortality per cent recorded in layer was 28.60. The season-wise pattern of occurrence of ILT was studied as the incidence peaked during mid-summer of 2011 where the mortality rate increased from 5 to 25 per cent in birds raised under intensive system and decreased in winter. The field isolates were confirmed by Agar Gel Precipitation Test and histopathology. Histopathological examination of affected trachea revealed presence of intranuclear inclusions. Twenty tracheal samples collected from suspected outbreaks of ILT from 34 layer farms were propagated in embryonated chicken eggs via chorioallantoic membrane (CAM) route showed typical pock lesions and thickening of CAM. Molecular characterization of the field ILTV isolates were carried out by amplification of ICP4 gene and Tk gene by polymerase chain reaction and produced amplicons size of 635 bp and 649 bp respectively. Restriction endonuclease analysis of ILTV field isolates were carried out for the Tk gene amplicons size of 649 bp with endonuclease enzymes viz. HaeIII, Sau 96I and NciI and two bands of sizes of 420 and 226 bp for HaeIII, three bands of sizes of 410, 176 and 60 bp with Sau96I and there was no cleavage with NciI were observed. The same RFLP pattern could be observed for the vaccine strain also. The PCR products of Tk gene and ICP4 gene of the twenty field ILTV isolates were sequenced and compared with reference and vaccine strains. The sequence analysis showed that the homology of nucleotide sequences between the twenty field isolates was 99.2 – 100 per cent for ICP4 gene and 96.5 – 100 per cent for Tk gene and between the isolates, reference and vaccine strain were 99.2 - 100 per cent for ICP4 gene and 96.5 -100 per cent for the Tk gene. Multiple sequence alignment analysis of the nucleotide sequences with that of vaccine strain of ILTV showed that nucleotide mutation at two different positions in ICP4 gene and six different positions in Tk gene of all the isolates. Phylogenetic analysis on the ICP4 gene and Tk gene sequence of the twenty isolates, vaccine strain and three other reference strains revealed that they were indistinguable. The protein profile of field ILTV isolates and vaccine strain were studied by Sodium Dodecyl sulphate – Polyacrylamide Gel Electrophoresis and which yielded four polypeptides of molecular weights viz., 60, 85,160 and 205 kDa. A dot-ELISA technique was developed for detection of ILTV from field samples. |
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Date |
2016-07-26T16:19:28Z
2016-07-26T16:19:28Z 2013 |
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Type |
Thesis
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Identifier |
http://krishikosh.egranth.ac.in/handle/1/69970
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Language |
en
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Format |
application/pdf
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Publisher |
Tamil Nadu Veterinary and Animal Sciences University
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