Gene Tagging of Fertility Restorer Gene for ARG Cytoplasm of Sunflower (Helianthus annuus L.) using RAPDs, ISSRs and Sunflower Specific SSRs
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Title |
Gene Tagging of Fertility Restorer Gene for ARG Cytoplasm of Sunflower (Helianthus annuus L.) using RAPDs, ISSRs and Sunflower Specific SSRs
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Creator |
INDUMATHI BUTTA
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Contributor |
Sreelakshmi, B
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Subject |
Gene, Tagging, Fertility, Restorer, Gene, ARG, Cytoplasm, Sunflower, using, RAPDs, ISSRs, Sunflower, Specific, SSRs
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Description |
Cytoplasmic male sterility is the most viable system for hybrid seed production in sunflower. Till date, a single source of cytoplasm PET-1 has been used for hybrid seed production in sunflower, which increases genetic vulnerability to pathogens. To overcome this, there is a need for development of new cytoplasmic sources and characterization of the restorers for use in hybrid breeding programs. In this regard, the present investigation was carried out with the aim of genetic study of ‘ARG’ for fertility restoration and to identify molecular markers linked to fertility restoration of the new CMS derived from Helianthus argophyllus. For the genetic study of fertility restoration, F2 and BC1F1 populations of ARG x DSI 176 were used. By phenotypic fertility analysis, typical segregation patterns of 3:1 and 1:1 for fertile: sterile were obtained in F2 and BC1F1 populations respectively. Thus it was confirmed that a single dominant gene was responsible for fertility restoration. To identify molecular markers linked to male fertility restorer gene, the method of Bulk Segregant Analysis was employed. Three marker systems viz., RAPD, ISSR and SSR were used to identify markers closely linked to the gene. Screening the fertile and sterile bulks with 571 RAPDs, 100 ISSRs and 120 SSRs, we found that an SSR marker SF-19 was found to be linked to fertility restorer gene. Along with this, a partial fertility restorer line with white pollen was taken, where, SF-19 failed to give polymorphism with yellow and white pollen bulks indicating that the partial restorer do not carry the fr gene. The yellow and white pollen bulks were constituted to identify molecular markers linked to colour of the pollen. Among three marker systems used to screen bulks, one RAPD marker OPU9_1200 was found to be linked to yellow pollen gene, which was converted to sequence specific SCAR marker, which also confirmed at individual plant level as well. Analysis by using 120 SSR markers, resulted in identification of 2 markers ORS468 and ORS331 linked to yellow pollen gene. Interestingly these two markers were located on the same linkage group (LG) 7. By interval mapping one more marker ORS 966 was found to be linked to yellow colour. Thus, the SF-19 marker linked to fertility restorer gene can be used for the development of new restorer lines through MAS. The SCAR marker developed and three SSRs identified linked to colour of the pollen can be used to map some important traits linked to colour of the pollen. |
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Date |
2016-08-20T14:15:32Z
2016-08-20T14:15:32Z 2005 |
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Type |
Thesis
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Identifier |
http://krishikosh.egranth.ac.in/handle/1/73189
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Language |
en
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Relation |
D7689;
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Format |
application/pdf
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Publisher |
ACHARYA N.G.RANGA AGRICULTURAL UNIVERSITY, RAJENDRANAGAR, HYDERABAD
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