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EST-derived single nucleotide polymorphism markers for assembling genetic and physical map of the barley genome

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Title EST-derived single nucleotide polymorphism markers for assembling genetic and physical map of the barley genome
 
Creator Kota, R.
Varshney, R. K.
Prasad, M.
Zhang, H.
Stein, N.
Graner, A.
 
Subject Molecular markers
SNPs
Haplotype diversity
Nucleotide diversity
Genetic map
 
Description In a panel of seven genotypes, 437 expressed
sequence tag (EST)-derived DNA fragments were sequenced. Single nucleotide polymorphisms (SNPs) that
were polymorphic between the parents of three mapping
populations were mapped by heteroduplex analysis and a
genome-wide consensus map comprising 216 EST-derived
SNPs and 4 InDel (insertion/deletion) markers was constructed. The average frequency of SNPs amounted to 1/130 bp and 1/107.8 bp for a set of randomly selected and a set
of mapped ESTs, respectively.
 
Date 2013-11-07T10:43:33Z
2013-11-07T10:43:33Z
2008
15 September 2007
 
Type Article
 
Identifier Funct. Integr. Genomics, 8: 223-233
http://hdl.handle.net/123456789/90
 
Language en
 
Publisher Springer