ICAR Research Data Repository for Knowledge Management
A search tool for identification and analysis of conserved sequence patterns in Saccharomyces spp. orthologous promoter.
DIR@IMTECH: CSIR-Institute of Microbial Technology
View Archive Info| Field | Value | |
| Title |
A search tool for identification and analysis of conserved sequence patterns in Saccharomyces spp. orthologous promoter.
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| Creator |
Kohli, Davinder K
Srikanth, Chittur V Bachhawat, Anand K |
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| Subject |
QR Microbiology
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| Description |
We describe a web-based resource to identify, search and analyze sequence patterns conserved in the multiple sequence alignments of orthologous promoters from closely related / distant Saccharomyces spp. The webtool interfaces with a database where conserved sequence patterns (greater than 4 bp) have been previously extracted from genome-wide promoter alignments, allowing one to carry out user-defined genome-wide searches for conserved sequences to assist in the discovery of novel promoter elements based on comparative genomics. The web-based server can be accessed at http://www2.imtech.res.in/ anand/sacch_prom_pat.html.
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| Publisher |
The Bioinformation Systems
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| Date |
2004
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| Type |
Article
PeerReviewed |
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| Format |
text/html
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| Identifier |
http://crdd.osdd.net/open/197/1/bachhawat2004.mht
Kohli, Davinder K and Srikanth, Chittur V and Bachhawat, Anand K (2004) A search tool for identification and analysis of conserved sequence patterns in Saccharomyces spp. orthologous promoter. In silico biology, 4 (4). pp. 411-5. ISSN 1386-6338 |
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| Relation |
http://www.bioinfo.de/isb/2004040034/
http://crdd.osdd.net/open/197/ |
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