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Genome sequencing and annotation of Amycolatopsis azurea {DSM} 43854T

DIR@IMTECH: CSIR-Institute of Microbial Technology

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Title Genome sequencing and annotation of Amycolatopsis azurea {DSM} 43854T
 
Creator Khatri, Indu
Subramanian, Srikrishna
Mayilraj, Shanmugam
 
Subject QR Microbiology
 
Description We report the 9.2 Mb genome of the azureomycin A and B antibiotic producing strain Amycolatopsis azurea isolated from a Japanese soil sample. The draft genome of strain DSM 43854T consists of 9,223,451 bp with a G + C content of 69.0% and the genome contains 3 rRNA genes (5S–23S–16S) and 58 aminoacyl-tRNA synthetase genes. The homology searches revealed that the PKS gene clusters are supposed to be responsible for the biosynthesis of naptomycin, macbecin, rifamycin, mitomycin, maduropeptin enediyne, neocarzinostatin enediyne, C-1027 enediyne, calicheamicin enediyne, landomycin, simocyclinone, medermycin, granaticin, polyketomycin, teicoplanin, balhimycin, vancomycin, staurosporine, rubradirin and complestatin.
 
Publisher Elsevier Science
 
Date 2014
 
Type Article
PeerReviewed
 
Format application/pdf
 
Identifier http://crdd.osdd.net/open/1502/1/mayil2014.pdf
Khatri, Indu and Subramanian, Srikrishna and Mayilraj, Shanmugam (2014) Genome sequencing and annotation of Amycolatopsis azurea {DSM} 43854T. Genomics Data , 2. 44 - 45.
 
Relation http://www.sciencedirect.com/science/article/pii/S221359601400004X
http://crdd.osdd.net/open/1502/