Record Details

Functional assessment of tyrosinase variants identified in individuals with albinism is essential for unequivocal determination of genotype-to-phenotype correlation

EPrints@IICB

View Archive Info
 
 
Field Value
 
Title Functional assessment of tyrosinase variants identified in
individuals with albinism is essential for unequivocal
determination of genotype-to-phenotype correlation
 
Creator Mondal, M
Sengupta, M
Ray, Kunal
 
Subject Molecular & Human Genetics
 
Description Oculocutaneous albinism type 1 (OCA1), caused by pathogenic variations in the tyrosinase gene (TYR), is the most frequent and severe form of hypopigmentary disorder worldwide. While OCA1A manifests as a complete loss of melanin pigment, patients with OCA1B show residual pigmentation of the skin, hair and eyes. Limited experimental evidence suggests retention of TYR in
the endoplasmic reticulum (ER) causes OCA1 pathogenesis. However, a comprehensive functional analysis of TYR missense variations and correlation with genotype
is lacking. Objectives Functional characterization of nonsynonymous tyrosinase variants in patients with OCA1 reported in the Albinism Database, dbSNP and the published
literature, and an attempt to correlate them with reported and predicted phenotypes. Thirty-four reported missense variants of TYR were subcloned by sitedirected
mutagenesis, and the dual-enzyme activities of the variant proteins were compared with the wild-type. The degree of ER retention was also checked for each of the variants through endoglycosidase H (Endo H) digestion followed by
immunoprecipitation and densitometric analysis. Functional studies revealed one reported OCA1A variation with nearly100% enzyme activity, 10 OCA1B variants lacking any enzyme activity, eight nonsynonymous single-nucleotide polymorphisms (SNPs) with ~30–70% of enzyme activity, and three SNPs that completely lacked activity altogether. The
Endo H assay corroborated these results.Loss of enzyme activity of TYR variants was completely in agreement
with ER retention across all variants examined. The results of the assay clearly established that determination of the biological activity of identified variants in patients with OCA is essential to correlate the identified suspect genotype with the obvious phenotype of the disease.
 
Publisher Blackwell Publishing
 
Date 2016
 
Type Article
PeerReviewed
 
Format application/pdf
 
Identifier http://www.eprints.iicb.res.in/2597/1/British_Journal_of_Dermatology_(2016)_175%2C.pdf
Mondal, M and Sengupta, M and Ray, Kunal (2016) Functional assessment of tyrosinase variants identified in individuals with albinism is essential for unequivocal determination of genotype-to-phenotype correlation. British Journal Of Dermatology, 175. pp. 1232-1242.
 
Relation http://dx.doi.org/10.1111/bjd.14977
http://www.eprints.iicb.res.in/2597/