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A Strain of an Emerging Indian pv. oryzae Pathotype Defeats the Rice Bacterial Blight Resistance Gene Without Inducing a Clade III Gene and Is Nearly Identical to a Recent Thai Isolate.

DIR@IMTECH: CSIR-Institute of Microbial Technology

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Title A Strain of an Emerging Indian pv. oryzae Pathotype Defeats the Rice Bacterial Blight Resistance Gene Without Inducing a Clade III Gene and Is Nearly Identical to a Recent Thai Isolate.
 
Creator Carpenter, Sara C D
Mishra, Prashant
Ghoshal, Chandrika
Dash, Prasanta K
Wang, Li
Midha, Samriti
Laha, Gouri S
Lore, Jagjeet S
Kositratana, Wichai
Singh, Nagendra K
Singh, Kuldeep
Patil, Prabhu B
Oliva, Ricardo
Patarapuwadol, Sujin
Bogdanove, Adam J
Rai, Rhitu
 
Subject QR Microbiology
 
Description The rice bacterial blight pathogen pv. oryzae () injects transcription activator-like effectors (TALEs) that bind and activate host "susceptibility" () genes important for disease. Clade III genes are major S genes for bacterial blight. The resistance genes , which reduces TALE activity generally, and , a allele not recognized by the cognate TALE, have been effectively deployed. However, strains that defeat both resistance genes individually were recently reported in India and Thailand. To gain insight into the mechanism(s), we completely sequenced the genome of one such strain from each country and examined the encoded TALEs. Strikingly, the two strains are clones, sharing nearly identical TALE repertoires, including a TALE known to activate strongly enough to be effective even when diminished by . We next investigated gene induction by the Indian strain. The Indian strain induced no clade III in plants harboring , indicating a pathogen adaptation that relieves dependence on these genes for susceptibility. The findings open a door to mechanistic understanding of the role genes play in susceptibility and illustrate the importance of complete genome sequence-based monitoring of populations in developing varieties with effective disease resistance.
 
Publisher Frontiers Media S.A
 
Date 2018-11-13
 
Type Article
PeerReviewed
 
Relation https://www.frontiersin.org/articles/10.3389/fmicb.2018.02703/full
http://crdd.osdd.net/open/2136/
 
Identifier Carpenter, Sara C D and Mishra, Prashant and Ghoshal, Chandrika and Dash, Prasanta K and Wang, Li and Midha, Samriti and Laha, Gouri S and Lore, Jagjeet S and Kositratana, Wichai and Singh, Nagendra K and Singh, Kuldeep and Patil, Prabhu B and Oliva, Ricardo and Patarapuwadol, Sujin and Bogdanove, Adam J and Rai, Rhitu (2018) A Strain of an Emerging Indian pv. oryzae Pathotype Defeats the Rice Bacterial Blight Resistance Gene Without Inducing a Clade III Gene and Is Nearly Identical to a Recent Thai Isolate. Frontiers in microbiology, 9. p. 2703. ISSN 1664-302X