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Development of a model webserver for breed identification using microsatellite DNA marker.

DIR@IMTECH: CSIR-Institute of Microbial Technology

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Title Development of a model webserver for breed identification using microsatellite DNA marker.
 
Creator Iquebal, Mir Asif
Sarika, .
Dhanda, Sandeep Kumar
Arora, Vasu
Dixit, Sat Pal
Raghava, Gajendra P S
Rai, Anil
Kumar, Dinesh
 
Subject QR Microbiology
 
Description Identification of true to breed type animal for conservation purpose is imperative. Breed dilution is one of the major problems in sustainability except cases of commercial crossbreeding under controlled condition. Breed descriptor has been developed to identify breed but such descriptors cover only "pure breed" or true to the breed type animals excluding undefined or admixture population. Moreover, in case of semen, ova, embryo and breed product, the breed cannot be identified due to lack of visible phenotypic descriptors. Advent of molecular markers like microsatellite and SNP have revolutionized breed identification from even small biological tissue or germplasm. Microsatellite DNA marker based breed assignments has been reported in various domestic animals. Such methods have limitations viz. non availability of allele data in public domain, thus each time all reference breed has to be genotyped which is neither logical nor economical. Even if such data is available but computational methods needs expertise of data analysis and interpretation.
 
Publisher BMC part of Springer Nature
 
Date 2013-12-09
 
Type Article
PeerReviewed
 
Relation https://bmcgenet.biomedcentral.com/articles/10.1186/1471-2156-14-118
http://crdd.osdd.net/open/2442/
 
Identifier Iquebal, Mir Asif and Sarika, . and Dhanda, Sandeep Kumar and Arora, Vasu and Dixit, Sat Pal and Raghava, Gajendra P S and Rai, Anil and Kumar, Dinesh (2013) Development of a model webserver for breed identification using microsatellite DNA marker. BMC genetics, 14. p. 118. ISSN 1471-2156