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Dataset for: The African Sweetpotato Virome

International Potato Center Dataverse OAI Archive

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Title Dataset for: The African Sweetpotato Virome
 
Identifier https://doi.org/10.21223/DOSS60
 
Creator Kreuze, Jan
Fei, Zhangjun
 
Publisher International Potato Center
 
Description The dataset of the African Sweetpotato Virome is organized in a webpage which includes photos (from field, plants, and collected leaves), field information, and molecular information (genome sequences) of the detected and identified viruses (known and unknown) which are necessary to better understand the diversity and distribution of viruses in Africa (Angola, Benin, Burkina Faso, Ethiopia, Ghana, Guinea, Malawi, Mozambique, Nigeria, Tanzania, Uganda, Zimbabwe). It represents a baseline for monitoring changes of viral populations and the risk they represent for sweet potato cultivation under a changing climate. Link to download this dataset: http://bioinfo.bti.cornell.edu/virome
 
Subject Agricultural Sciences
Small RNA
High-throughput sequencing
Deep sequencing
Virus detection
 
Language English
 
Contributor Administrator, CIP
CGIAR Research Program on Roots, Tubers and Bananas (RTB)
National Science Foundation (NSF)
Bill and Melinda Gates Foundation (BMFG)
International Potato Center
Dina Gutierrez; Segundo Fuentes; Zhangjun Fei; Jan Kreuze; Joseph Ndunguru; Martine Tachin; Britta Kowalski; Paul Demo; Martin Chiona; Ian Robertson; Elizabeth Ngadze; Douglas Miano; Settumba Mukasa; Steffen Schulz
Project: Project: Determining the Pan-African sweet potato virome: understanding virus diversity, distribution and evolution and their impacts on sweet potato production in Africa
 
Type xls; jpg