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Dataset for: Genome-wide association study identified candidate genes controlling continuous storage root formation and bulking in hexaploid sweetpotato

International Potato Center Dataverse OAI Archive

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Title Dataset for: Genome-wide association study identified candidate genes controlling continuous storage root formation and bulking in hexaploid sweetpotato
 
Identifier https://doi.org/10.21223/KM16BH
 
Creator Bararyenya, Astere
Olukolu, Bode
Tukamuhabwa, Phinehas
Gruneberg, Wolfgang
Ssali, Reuben
Low, Jan
Odong, Thomas
Ssemakula, Mildred
Talwana, Herbert
Mwila, Natasha
Mwanga, Robert
Arfang, Badji
Kyalo, Martina
Yao, Nasser
Gemenet, Dorcus
Kitavi, Mercy
 
Publisher International Potato Center
 
Description The data set for the “Genome-Wide Association Study Identified Candidate Genes Controlling Continuous Storage Root Formation and Bulking in Hexaploid Sweetpotato’” BMC Plant Biology, has has data sets for on-station plant breeding trials conducted at Namulonge in Wakiso district respectively between 2017 and 2018 and genomic data generated through laboratory work conducted at BecA-IRLI Hub from February to July 2018, leading to an original research article. The on-station data are in Excel format for Sweetpotato Breeding Protocol (manual) http://www.sweetpotatoknowledge.org/). The on-station data on Continuous storage root formation and bulking scores, root numbers, vegetative growth data, and root weight from plots over 4 harvest times used to estimate growth overtime and compute root yield, and biomass yield was the basis for the article. The pdf file has details on background information, site description, materials and methods, analysis, results and discussion, and relevant tables and illustrations. Supporting raw data and analysis tables include spreadsheets for single harvests (at 90, 120, 150 and 180 days after planting), the combined datasheet, and its respective analysis tables, summary means and breeding value estimations, as well as Kinship data, Multi-allelic data, SNP data, fastq files, and GAPIT data.
 
Subject Agricultural Sciences
Genotyping-by-sequencing
Genome-wide association study (GWAS)
Continuous storage root formation and bulking (CSRFAB)
GBSpoly
Polyploid
Single-nucleotide polymorphism (SNP)
Sweetpotato
 
Language English
 
Contributor Administrator, CIP
CGIAR Research Program on Roots, Tubers and Bananas (RTB)
Bill and Melinda Gates Foundation (BMFG)
International Potato Center
 
Type fastq