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Data files related to Pearl millet draft genome assembly v1.1, scaffolds and annotations

ICRISAT Dataverse Dataverse OAI Archive

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Title Data files related to Pearl millet draft genome assembly v1.1, scaffolds and annotations
 
Identifier https://doi.org/10.21421/D2/SY6VXQ
 
Creator Rajeev K. Varshney
Chengcheng Shi
Mahendar Thudi
Cedric Mariac
Jason Wallace
Peng Qi
He Zhang
Yusheng Zhao
Xiyin Wang
Abhishek, Rathore
Rakesh K. Srivastava
Annapurna Chitikineni
Guangyi Fan
Prasad Bajaj
Somashekhar Punnuri
Gupta SK
Hao Wang
Yong Jiang
Marie Couderc
Mohan A. V. S. K. Katta
Dev R. Paudel
K. D. Mungra
Wenbin Chen
Karen R. Harris-Shultz
Vanika Garg
Neetin Desai
Dadakhalandar Doddamani
Ndjido Ardo Kane
Joann A. Conner
Arindam Ghatak
Palak Chaturvedi
Sabarinath Subramaniam
Om Prakash Yadav
Cécile Berthouly-Salazar
Falalou Hamidou
Jianping Wang
Xinming Liang
Jérémy Clotault
Hari D. Upadhyaya
Philippe Cubry
Benedicte Rhone
Mame Codou Gueye
Ramanjulu Sunkar
Christian Dupuy
Francesca Sparvoli
Shifeng Cheng
R. S. Mahala
Bharat Singh
Rattan S. Yadav
Eric Lyons
Swapan K. Datta
C. T. Hash
Katrien M. Devos
Edward Buckler
Jeffrey L. Bennetzen
Andrew H. Paterson
Peggy Ozias-Akins
Stefania Grando
Jun Wang
Trilochan Mohapatra
Wolfram Weckwerth
Jochen C. Reif
Xin Liu
Yves Vigouroux
Xun Xu
 
Publisher ICRISAT Dataverse
 
Description The data files contains draft genome sequence of Pearl Millet along with its structural and functional annotation. The sequence of seven chromosomes are available in FASTA file "pearl_millet_v1.1.fa", whereas those assembled sequences (scaffolds) which could not be mapped to any of the seven chromosomes are dumped into another FASTA file "pearl_millet_v1.1.chrUn.fa". The structural annotation of these two types of genome sequences (draft assembly and unmapped scaffold sequences) is available in GFF files "PM.genechr.trans.gff" and "PM.genescf.gff", respectively.




Genome Manuscript



BAM Files and SNP files

 
Subject Agricultural Sciences
Peptides
Pearl millet
Genome
Chromosomes
Biosynthesis
 
Contributor Dataverse, Administrator
 
Type Genome Sequence