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<p>Bacterial and archaeal communities in near-surface marine sediments from İzmir Bay (Eastern Aegean Sea), using Quantitative PCR</p>

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Title Statement <p>Bacterial and archaeal communities in near-surface marine sediments from İzmir Bay (Eastern Aegean Sea), using Quantitative PCR</p>
 
Added Entry - Uncontrolled Name Kacar, A ; Dokuz Eylul University
Omuzbuken, B ; Dokuz Eylul University
 
Uncontrolled Index Term Archaea, Bacteria, Desulfobulbus, Desulfosarcina-Desulfococcus, Sulfate-reducing bacteria
 
Summary, etc. <p style="text-align: justify;">Marine sediments are good sources of both subsistent and anthropogenic ingredients. Recently, an assessment of phylogenetic analysis at the genotypic and molecular levels has revealed the phylogenetic relationships of the prokaryotes. In our study, samples were collected from the surface of sediments in the İzmir Bay, located in the eastern Aegean Sea and surrounded by the coastal city of İzmir. Total genomic DNA was extracted from 0.25 g sediment of each sample and used in real-time qPCR to detect 16S rDNA genes of archaea, bacteria, sulfate-reducing bacteria, <em>Desulfobulbus</em>, and <em>Desulfosarcina</em>-<em>Desulfococcus</em>. Our results showed that the maximum number of all samples was found in bacterial primers (1.24×10<sup>9</sup> DNA copy numbers/g), while the minimum number was observed in <em>Desulfosarcina-Desulfococcus</em> primers (1.17×10<sup>2</sup> DNA copy numbers/g). Consequently, genetic studies should focus on investigating the abundance levels of seasonal and annual microbial groups in future studies.</p>
 
Publication, Distribution, Etc. Indian Journal of Geo-Marine Sciences (IJMS)
2022-09-01 00:11:22
 
Electronic Location and Access application/pdf
http://op.niscair.res.in/index.php/IJMS/article/view/45885
 
Data Source Entry Indian Journal of Geo-Marine Sciences (IJMS); ##issue.vol## 51, ##issue.no## 02 (2022)
 
Language Note en