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Statistical approach for gene set analysis with trait specific quantitative trait loci

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Title Statistical approach for gene set analysis with trait specific quantitative trait loci
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Creator Samarendra Das
Anil Rai,
Dwijesh C. Mishra
Shesh N. Rai
 
Subject QTL
Gene set analysis
GSAQ
 
Description Not Available
The analysis of gene sets is usually carried out based on gene ontology terms and known biological pathways. These approaches may not establish any formal relation between genotype and trait specific phenotype. In plant biology and breeding, analysis of gene sets with trait specific Quantitative Trait Loci (QTL) data are considered as great source for biological knowledge discovery. Therefore, we proposed an innovative statistical
approach called Gene Set Analysis with QTLs (GSAQ) for interpreting gene expression data in context of gene sets with traits. The utility of GSAQ was studied on five different complex abiotic and biotic stress scenarios in rice, which yields specific trait/stress enriched gene sets.
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Date 2018-02-21T16:36:18Z
2018-02-21T16:36:18Z
2018-02-05
 
Type Research Paper
 
Identifier Not Available
Not Available
http://krishi.icar.gov.in/jspui/handle/123456789/5840
 
Language English
 
Relation Not Available;
 
Publisher Macmillan Publishers Limited, part of Springer Nature