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In-silico mining and characterisation of TIFY genes in mango

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Title In-silico mining and characterisation of TIFY genes in mango
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Creator Israr Ahmad, Muthukumar M and Rajan S
 
Subject Dashehari, Jelly seed, TIFY
 
Description Not Available
Mango (Mangifera indica L.) is an important
commercial fruit worldwide. Dashehari cultivar of
mango is one of the foremost varieties of North India
and is liked due to its high pulp content, aroma and
pleasant taste. Jelly seed formation is major disorder
during Dashehari fruit ripening where it is
commercially grown. However molecular mechanism
behind this disorder is uncertain. We have mined 6
different TIFY transcription factors genes/transcripts
(MiTIFY3B, MiTIFY4B, MiTIFY5A, MiTIFY6B,
MiTIFY9, MiTIFY10A) in the fruit transcriptome data
of mango jelly seed tissue. Except MiTIFY4B
(CDS_17202) and MiTIFY6B (CDS_3945), all mined
mango TIFY proteins contain the conserved TIFY
(TIFY) and Jas domain (FN2KRK). To decipher role of TIFY factors in this disorder, the
expression analysis through semi-quantative RT-PCR
was analysed at 0 dpa, 10 dpa, ripe pulp and jelly seed,
revealing that these TIFY genes play developmental
and ripening roles. Expression patterns of the
TIFY genes during fruit development and ripening
indicated that they may be involved in development and
ripening by the JA signaling pathway. Our findings
provide for a further functional characterization of
the TIFY family genes in mango and open the window
of investigation of an important TIFY transcription
factor family of genes and its role in mango fruit
development and ripening
Not Available
 
Date 2021-08-12T06:30:15Z
2021-08-12T06:30:15Z
2021-02-01
 
Type Article
 
Identifier Not Available
Not Available
http://krishi.icar.gov.in/jspui/handle/123456789/55265
 
Language English
 
Relation Not Available;
 
Publisher Not Available