In-silico mining and characterisation of TIFY genes in mango
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Title |
In-silico mining and characterisation of TIFY genes in mango
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Creator |
Israr Ahmad, Muthukumar M and Rajan S
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Subject |
Dashehari, Jelly seed, TIFY
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Description |
Not Available
Mango (Mangifera indica L.) is an important commercial fruit worldwide. Dashehari cultivar of mango is one of the foremost varieties of North India and is liked due to its high pulp content, aroma and pleasant taste. Jelly seed formation is major disorder during Dashehari fruit ripening where it is commercially grown. However molecular mechanism behind this disorder is uncertain. We have mined 6 different TIFY transcription factors genes/transcripts (MiTIFY3B, MiTIFY4B, MiTIFY5A, MiTIFY6B, MiTIFY9, MiTIFY10A) in the fruit transcriptome data of mango jelly seed tissue. Except MiTIFY4B (CDS_17202) and MiTIFY6B (CDS_3945), all mined mango TIFY proteins contain the conserved TIFY (TIFY) and Jas domain (FN2KRK). To decipher role of TIFY factors in this disorder, the expression analysis through semi-quantative RT-PCR was analysed at 0 dpa, 10 dpa, ripe pulp and jelly seed, revealing that these TIFY genes play developmental and ripening roles. Expression patterns of the TIFY genes during fruit development and ripening indicated that they may be involved in development and ripening by the JA signaling pathway. Our findings provide for a further functional characterization of the TIFY family genes in mango and open the window of investigation of an important TIFY transcription factor family of genes and its role in mango fruit development and ripening Not Available |
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Date |
2021-08-12T06:30:15Z
2021-08-12T06:30:15Z 2021-02-01 |
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Type |
Article
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Identifier |
Not Available
Not Available http://krishi.icar.gov.in/jspui/handle/123456789/55265 |
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Language |
English
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Relation |
Not Available;
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Publisher |
Not Available
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