Record Details

Identification of EST derived microsatellite markers for heat stress tolerance in Solanum melongena by in silico methods

KRISHI: Publication and Data Inventory Repository

View Archive Info
 
 
Field Value
 
Title Identification of EST derived microsatellite markers for heat stress tolerance in Solanum melongena by in silico methods
Not Available
 
Creator REENA ROSY THOMAS, M. KRISHNA REDDY, RIAZ MAHMOOD AND M. K. CHANDRA PRAKASH
 
Subject Solanum melongena, EST sequences, heat stress tolerance, microsatellite markers, HSP90
 
Description Not Available
The extreme environmental conditions disturbs plant growth and development, restricting the genetic potential and yield losses in plants. It is necessary to understand plant responses to stresses that disturbs the homeostatic equilibrium. Newer genes and markers need to be identified to make heat stress tolerant crops and comparative studies in ancestral plant groups can help to understand the complex biological processes. The plants cope with adverse temperature conditions by regulating various mechanism and sustains high temperature stress by producing heat shock proteins (HSPs) and innate immunity and abiotic stress tolerance in higher plants. In this context, in silico methods were used to discover new EST derived microsatellite markers associated with heat stress tolerance in Solanum melongena for
plant breeding programme as they are directly linked to functional genes. The publically available EST collection of S. melongena were explored to identify EST linked markers associated with heat tolerance. Approximately 529 EST sequences having repeats were analyzed for stress tolerance using insilico methods. These were categorized into 11 different protein superfamilies implicated in stress tolerance based on conserved domain and protein functions. Among these, five unique EST sequences pertains to HSP90 superfamily associated with heat stress tolerance were found having a microsatellite marker. These are potential markers useful for marker assisted selection in breeding programs and also facilitate the targeted research for development of heat stress tolerant crops.
Not Available
 
Date 2019-04-24T08:02:41Z
2019-04-24T08:02:41Z
2015-08
 
Type Journal
 
Identifier Not Available
Not Available
http://krishi.icar.gov.in/jspui/handle/123456789/18813
 
Language English
 
Relation Not Available;
 
Publisher WORLD WIDE JOURNALS