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DNA barcoding of phytopathogens for disease diagnostics and bio-surveillance

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Title DNA barcoding of phytopathogens for disease diagnostics and bio-surveillance
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Creator 200. Choudhary, P., Singh, B.N., Chakdar, H. and Saxena, AK
 
Subject Barcode; Genome skimming; Meta-barcoding; Next generation sequencing
 
Description Not Available
DNA barcoding has proven to be a versatile tool for plant disease diagnostics in the genomics era. As the mass parallel and next generation sequencing techniques gained importance, the role of specific barcodes came under immense scrutiny. Identification and accurate classification of phytopathogens need a universal approach which has been the main application area of the concept of barcode. The present review entails a detailed description of the present status of barcode application in plant disease diagnostics. A case study on the application of Internal Transcribed Spacer (ITS) as barcode for Aspergillus and Fusarium spp. sheds light on the requirement of other potential candidates as barcodes for accurate identification. The challenges faced while barcoding novel pathogens have also been discussed with a comprehensive outline of integrating more recent technologies like meta-barcoding and genome skimming for detecting plant pathogens.
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Date 2021-08-28T10:49:05Z
2021-08-28T10:49:05Z
2021-01-01
 
Type Review Paper
 
Identifier Not Available
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http://krishi.icar.gov.in/jspui/handle/123456789/60953
 
Language English
 
Relation Not Available;
 
Publisher Springer