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Molecular phylogeny of commercially important lobster species from Indian coast inferred from mitochondrial and nuclear DNA sequences

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Title Molecular phylogeny of commercially important lobster species from Indian coast inferred from mitochondrial and nuclear DNA sequences
Not Available
 
Creator N S Jeena
A Gopalakrishnan
E V Radhakrishnan
Joe K Kizhakudan
V S Basheer
P K Asokan
J K Jena
 
Subject Mitochondrial markers
lobsters
nuclear markers
 
Description Not Available
Lobsters constitute low-volume high-value crustacean fishery resource along Indian coast. For the conservation and management of this declining resource, accurate identification of species and larvae is essential. The objectives of this work were to generate species-specific molecular signatures of 11 commercially important species of lobsters of families Palinuridae and Scyllaridae and to reconstruct a phylogeny to clarify the evolutionary relationships among genera and species included in this study. Partial sequences were generated for all the candidate species from sampling sites along the Indian coast using markers like Cytochrome oxidase I (COI), 16SrRNA, 12SrRNA, and 18SrRNA genes, and analyzed. The genetic identities of widely distributed Thenus species along the Indian coast to be Thenus unimaculatus and the sub-species of Panulirus homarus to be P. homarus homarus were confirmed. Phylogeny reconstruction using the individual gene and concatenated mtDNA data set were carried out. The overall results suggested independent monophyly of Scyllaridae and Stridentes of Palinuridae. The interspecific divergence was found to be highest for the 12SrRNA compared with other genes. Significant incongruence between mtDNA and nuclear 18SrRNA gene tree topologies was observed. The results hinted an earlier origin for Palinuridae compared with Scyllaridae. The DNA sequence data generated from this study will aid in the correct identification of lobster larvae and will find application in research related to larval transport and distribution.
Not Available
 
Date 2021-07-26T05:29:46Z
2021-07-26T05:29:46Z
2015-06-11
 
Type Research Paper
 
Identifier Jeena, N.S., Gopalakrishnan, A., Radhakrishnan, E.V., Kizhakudan, J.K., Basheer, V.S., Asokan, P.K. and Jena, J.K., 2016. Molecular phylogeny of commercially important lobster species from Indian coast inferred from mitochondrial and nuclear DNA sequences. Mitochondrial DNA Part A, 27(4), pp.2700-2709.
2470-1408
2470-1394
http://krishi.icar.gov.in/jspui/handle/123456789/50091
 
Language English
 
Relation Not Available;
 
Publisher Taylor and Francis