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Comparative evaluation of fish larval preservation methods on microbiome profiles to aid in metagenomics research

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Relation http://eprints.cmfri.org.in/16004/
https://link.springer.com/article/10.1007/s00253-022-12026-6
https://doi.org/10.1007/s00253-022-12026-6
 
Title Comparative evaluation of fish larval preservation methods
on microbiome profiles to aid in metagenomics research
 
Creator Sumithra, T G
Sharma, S R Krupesha
Gayathri, S
Ebeneezar, Sanal
Reshma, K J
Anikuttan, K K
Iyapparajanarasimapallavan, G
Ramesh Kumar, P
Sakthivel, M
Linga Prabu, D
Tamilmani, G
Vijayagopal, P
Gopalakrishnan, A
 
Subject Fish Genetics
 
Description Applications of microbiome research through metagenomics promise to generate microbiome manipulation strategies for improved larval survival in aquaculture. However, existing lacunae on the effects of sample preservation methods in metagenome profiles hinder the successful application of this technique. In this context, four preservation methods were scrutinized to identify reliable methods for fish larval microbiome research. The results showed that a total of ten metagenomics metrics, including DNA yield, taxonomic and functional microbiome profiles, and diversity measures, were significantly (P 
 
Publisher Springer
 
Date 2022
 
Type Article
PeerReviewed
 
Format text
 
Language en
 
Identifier http://eprints.cmfri.org.in/16004/1/Applied%20Microbiology%20and%20Biotechnology_2022_Sumithra%20T%20G.pdf
Sumithra, T G and Sharma, S R Krupesha and Gayathri, S and Ebeneezar, Sanal and Reshma, K J and Anikuttan, K K and Iyapparajanarasimapallavan, G and Ramesh Kumar, P and Sakthivel, M and Linga Prabu, D and Tamilmani, G and Vijayagopal, P and Gopalakrishnan, A (2022) Comparative evaluation of fish larval preservation methods on microbiome profiles to aid in metagenomics research. Applied Microbiology and Biotechnology, 106 (11). pp. 1-17.