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RapGreen, an interactive software and web package to explore and analyze phylogenetic trees

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Title RapGreen, an interactive software and web package to explore and analyze phylogenetic trees
 
Creator Dufayard, Jean-François
Bocs, Stéphanie
Guignon, Valentin
Larivière, Delphine
Louis, Alexandra
Oubda, Nicolas
Rouard, Mathieu
Ruiz, Manuel
de Lamotte, Frédéric
 
Subject phylogeny
software development
digital technology
filogenia
desarrollo de programas informáticos
tecnología digital
 
Description RapGreen is a modular software package targeted at scientists handling large datasets for phylogenetic analysis. Its primary function is the graphical visualization and exploration of large trees. In addition, RapGreen offers a tree pattern search function to seek evolutionary scenarios among large collections of phylogenetic trees. Other functionalities include tree reconciliation with a given species tree: the detection of duplication or loss events during evolution and tree rooting. Last but not least, RapGreen features the ability to integrate heterogeneous data while visualizing and otherwise analyzing phylogenetic trees
 
Date 2021-08-23
2021-09-28T10:25:01Z
2021-09-28T10:25:01Z
 
Type Journal Article
 
Identifier Dufayard, J.; Bocs, S.; Guignon, V.; Larivière, D.; Louis, A.; Oubda, N.; Rouard, M.; Ruiz, M.; de Lamotte, F. (2021) RapGreen, an interactive software and web package to explore and analyze phylogenetic trees. NAR Genomics and Bioinformatics 3(3) ISSN: 2631-9268
2631-9268
https://hdl.handle.net/10568/115194
https://doi.org/10.1093/nargab/lqab088
 
Language en
 
Rights CC-BY-NC-4.0
Open Access
 
Format application/pdf
 
Publisher Oxford Academis
 
Source NAR Genomics and Bioinformatics