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Gene structure and comparative and phylogeneticanalyses of Catla catla CYP1A full-length cDNA and itsresponsiveness to benzo (a) pyrene and copper sulphate atearly developmental stages

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Title Gene structure and comparative and phylogeneticanalyses of Catla catla CYP1A full-length cDNA and itsresponsiveness to benzo (a) pyrene and copper sulphate atearly developmental stages
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Creator Kumari, K.,
Pathakota, G. B.,
Kumar, S.,
Krishna, G.
 
Subject Biomarker; Carp;
Fish; Heavy metal;
Pollution;
Polyaromatic hydrocarbons
 
Description Not Available
In the present study, full-length CYP1A cDNA from Catla catla (Catla) has been identified, and its real-time quantitative reverse transcription PCR (qRT-PCR) expression has been evaluated in different tissues, developmental stages (0, 3, 6, 12 and 24 h and 5, 7 and 9 days post-fertilization) and copper sulphate and benzo(a)pyrene (BaP)-treated 5-day post-fertilization (dpf) larvae (6 to 6.5 mm). Various structural, comparative and phylogenetic analyses of the deduced amino acid sequence revealed that the identified gene of Catla belongs to the CYP1A1 subfamily. Among different tissues of Catla, the highest CYP1A expression was observed in the kidney followed by the liver, muscle, gill, intestine and brain. CYP1A mRNA expression was detected during all the larval developmental stages, including the unfertilized egg with the highest expression on 9 dpf. BaP (3.5 ppb) and copper sulphate (sublethal dose 0.516 ppm) challenge test for 96 h to Catla larvae revealed the highest CYP1A1 expression at 48 h post-challenge. CYP1A1 transcript also showed a concentration-dependent increase in expression following exposure at 1.75 and 3.5 ppb of BaP for 48 h. Its expression profiling indicates that it is functional at early developmental stages. It can also be used to develop a specific biomarker tool for monitoring environmental pollution.
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Date 2019-09-12T14:47:40Z
2019-09-12T14:47:40Z
2018-02-01
 
Type Research Paper
 
Identifier Kumari, K., Pathakota, G. B., Kumar, S., Krishna, G.(2017). Gene structure and comparative and phylogeneticanalyses of Catla catla CYP1A full-length cDNA and itsresponsiveness to benzo (a) pyrene and copper sulphate atearly developmental stages. Fish Physiology andBiochemistry, 1-14. DOI:10.1007/s10695-017-0416-62016-20171.647 7.4432
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http://krishi.icar.gov.in/jspui/handle/123456789/23008
 
Language English
 
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