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Two decades of association mapping: Insights on disease resistance in major crops

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Relation http://oar.icrisat.org/12096/
https://www.frontiersin.org/articles/10.3389/fpls.2022.1064059/full
https://doi.org/10.3389/fpls.2022.1064059
 
Title Two decades of association mapping: Insights on disease resistance in major crops
 
Creator Gangurde, S S
Xavier, A
Naik, Y D
Jha, U C
Rangari, S K
Kumar, R
Reddy, M S S
Channale, S
Elango, D
Mir, R R
Zwart, R
Laxuman, C
Sudini, H K
Pandey, M K
Punnuri, S
Mendu, V
Reddy, U K
Guo, B
Gangarao, N V P R
Sharma, V K
Wang, X
Zhao, C
Thudi, M
 
Subject Climate Change
Plant Disease
 
Description Climate change across the globe has an impact on the occurrence, prevalence, and severity of plant diseases. About 30% of yield losses in major crops are due to plant diseases; emerging diseases are likely to worsen the sustainable production in the coming years. Plant diseases have led to increased hunger and mass migration of human populations in the past, thus a serious threat to global food security. Equipping the modern varieties/hybrids with enhanced genetic resistance is the most economic, sustainable and environmentally friendly solution. Plant geneticists have done tremendous work in identifying stable resistance in primary genepools and many times other than primary genepools to breed resistant varieties in different major crops. Over the last two decades, the availability of crop and pathogen genomes due to advances in next generation sequencing technologies improved our understanding of trait genetics using different approaches. Genome-wide association studies have been effectively used to identify candidate genes and map loci associated with different diseases in crop plants. In this review, we highlight successful examples for the discovery of resistance genes to many important diseases. In addition, major developments in association studies, statistical models and bioinformatic tools that improve the power, resolution and the efficiency of identifying marker-trait associations. Overall this review provides comprehensive insights into the two decades of advances in GWAS studies and discusses the challenges and opportunities this research area provides for breeding resistant varieties.
 
Publisher Frontiers Media
 
Date 2022-12-06
 
Type Article
PeerReviewed
 
Format application/pdf
 
Language en
 
Rights cc_attribution
 
Identifier http://oar.icrisat.org/12096/1/Frontiers%20in%20Plant%20Science_13_01-22_2022.pdf
Gangurde, S S and Xavier, A and Naik, Y D and Jha, U C and Rangari, S K and Kumar, R and Reddy, M S S and Channale, S and Elango, D and Mir, R R and Zwart, R and Laxuman, C and Sudini, H K and Pandey, M K and Punnuri, S and Mendu, V and Reddy, U K and Guo, B and Gangarao, N V P R and Sharma, V K and Wang, X and Zhao, C and Thudi, M (2022) Two decades of association mapping: Insights on disease resistance in major crops. Frontiers in Plant Science (TSI), 13. 01-22. ISSN 1664-462X