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Exploration of the candidate beneficial bacteria for Penaeus vannamei culture by core microbiome analysis using amplicon sequencing.

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Title Exploration of the candidate beneficial bacteria for Penaeus vannamei culture by core microbiome analysis using amplicon sequencing.
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Creator N. Lalitha
Berty Samuel Masilamoni Ronald
Murugesan Ananda Chitra
J. Ashok Kumar
K. Vinaya Kumar
Panjan Nathamuni Suganya
Hemalatha Senthilnayagam
Alagesan Senthilkumar
M.Muralidhar
 
Subject Aquaculture
Penaeus vannamei
Microbiome
Gut
Water
Sediment
Days of Culture
Amplicon Sequencing
 
Description Not Available
Globally, Penaeus vannamei is the vital species in aquaculture production. Beneficial bacterial exploration of gut, sediment, and water were investigated in P. vannamei culture using Illumina Miseq sequencing of 16S RNA V3-V4 hypervariable regions. Predominant phyla identified were Proteobacteria, Tenericutes, Bacteroidetes in gut; Proteobacteria, Bacteroidetes, Planctomycetes in sediment and Cyanobacteria, Proteobacteria, and Planctomycetes in water. In total, 46 phyla, 509 families and 902 genera; 70 phyla, 735 families and 1255 genera; 55 phyla, 580 families and 996 genera were observed in gut, sediment and water, respectively. Diversity of microbial communities in respect of observed Operational Taxonomic Units, diversity indices (Shannon and Simpson), richness index (Chao1) were significantly high P (
Not Available
 
Date 2023-10-23T11:32:16Z
2023-10-23T11:32:16Z
2023-08-04
 
Type Journal
 
Identifier Not Available
Not Available
http://krishi.icar.gov.in/jspui/handle/123456789/80778
 
Language English
 
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Publisher Not Available